RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 LCN12Q6JVE5 192 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 A0A0G2JMM0 328 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 A0A1W2PPB8 328 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 A0A1W2PRS3 328 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 KIR3DP1A8MWS1 328 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 BTCP35070 178 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF562Q6V9R5 426 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF833PQ6ZTB9 187 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 COL5A1P20908 1838 aaPredicted RBP3.56□□□□□ -1.84
VPS13C-202ENST00000261517 RBAKDNA6NC62 111 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 IGLV3-9A0A075B6K5 115 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM238C9JI98 176 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 BCL6BQ8N143 479 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-202ENST00000261517 TTC9CQ8N5M4 171 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 LINC01560Q8TB33 94 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 DUX3Q96PT4 197 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 SCGB3A1Q96QR1 104 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 FBXL15Q9H469 300 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 GAGE10A6NGK3 116 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 DPM2O94777 84 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF138P52744 262 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 CFAP161Q6P656 301 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 RNF182Q8N6D2 247 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 EAF1Q96JC9 268 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM256Q8N2U0 113 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 PAQR4Q8N4S7 273 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-202ENST00000261517 DMRTA2Q96SC8 542 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 RNF126Q9BV68 326 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF324O75467 553 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-202ENST00000261517 DCAF16Q9NXF7 216 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 APOMO95445 188 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 IGFBP2P18065 325 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 DDTP30046 118 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 SSC4DQ8WTU2 575 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 RMI2Q96E14 147 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 MALRD1Q5VYJ5 2156 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 BIVMQ86UB2 503 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 NRTNQ99748 197 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 PRDM13Q9H4Q3 707 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 ELANEP08246 267 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 C1QL2Q7Z5L3 287 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 DAZ1Q9NQZ3 744 aaKnown RBP3.55□□□□□ -1.84
VPS13C-202ENST00000261517 SIGLEC9Q9Y336 463 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 IGLV3-1P01715 115 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM200BQ69YZ2 307 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 FAM231DQ6ZW35 169 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 ZCCHC24Q8N2G6 241 aaKnown RBP3.55□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF114Q8NC26 417 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 CITED1Q99966 193 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 HIGD1CA8MV81 97 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 PRR32B1ATL7 298 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 VCYO14598 125 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 CELA3AP09093 270 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 CHAC1Q9BUX1 264 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 FREM1Q5H8C1 2179 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM141Q96I45 108 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 GAFA1Q96PS6 74 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 GGTLC1Q9BX51 225 aa3.55□□□□□ -1.84
VPS13C-202ENST00000261517 A0A0G2JNJ9 132 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 A6NNC1 897 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 FOXI3A8MTJ6 420 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-202ENST00000261517 PROB1E7EW31 1015 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 CSN3P07498 182 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 LAGE3Q14657 143 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 FAM216BQ8N7L0 139 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF502Q8TBZ5 544 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 FOXC2Q99958 501 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 Q9UFV3 132 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 CA1P00915 261 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-202ENST00000261517 USP9XQ93008 2570 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-202ENST00000261517 RAMP1O60894 148 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 GPR183P32249 361 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 INS-IGF2F8WCM5 200 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 MMP23AO75900 390 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 TGFAP01135 160 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 MST1P26927 711 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 NEGR1Q7Z3B1 354 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 NAV3Q8IVL0 2385 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 IGHV2-70DA0A0C4DH43 119 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-202ENST00000261517 NDUFA4O00483 81 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 SUMO2P61956 95 aaKnown RBP3.54□□□□□ -1.84
VPS13C-202ENST00000261517 SHANK2-AS3Q9BTD1 123 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 PSG8Q9UQ74 426 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 KIAA1549Q9HCM3 1950 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 TGIF2-C20orf24A0A0A6YYL0 155 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 RPRMLQ8N4K4 120 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 DPH3P1Q9H4G8 78 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 IGKV1D-43A0A0B4J1Z2 117 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 TIMM23O14925 209 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 FBXL19-AS1Q494R0 122 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 A0A1W2PPE3 182 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 SPRED2Q7Z698 418 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 SPXQ9BT56 116 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 DSCAMO60469 2012 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 RPL15P61313 204 aaKnown RBP3.54□□□□□ -1.84
VPS13C-202ENST00000261517 RPL36AP83881 106 aaKnown RBP3.54□□□□□ -1.84
VPS13C-202ENST00000261517 KRTAP27-1Q3LI81 207 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 TREML4Q6UXN2 200 aa3.54□□□□□ -1.84
VPS13C-202ENST00000261517 RPL36ALQ969Q0 106 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms