RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 PEMTQ9UBM1 199 aa12.96□□□□□ -0.33
SHTN1-201ENST00000260777 LAGE3Q14657 143 aa12.96□□□□□ -0.34
SHTN1-201ENST00000260777 ITLN2Q8WWU7 325 aaPredicted RBP12.96□□□□□ -0.34
SHTN1-201ENST00000260777 LYZL1Q6UWQ5 148 aa12.96□□□□□ -0.34
SHTN1-201ENST00000260777 ZNF329Q86UD4 541 aa12.96□□□□□ -0.34
SHTN1-201ENST00000260777 LINC01587Q99440 93 aa12.96□□□□□ -0.34
SHTN1-201ENST00000260777 TOMM40O96008 361 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 HAX1O00165 279 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 LINC00205P59089 165 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 GLMPQ8WWB7 406 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 PFN1P07737 140 aaKnown RBP12.95□□□□□ -0.34
SHTN1-201ENST00000260777 RNASE1P07998 156 aaKnown RBP12.95□□□□□ -0.34
SHTN1-201ENST00000260777 Q0VG73 95 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 WNT2P09544 360 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 LMO1P25800 156 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 PAX9P55771 341 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 PSG3Q16557 428 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 LDLRAD2Q5SZI1 272 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 MINOS1Q5TGZ0 78 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 MINOS1-NBL1R4GNA1 71 aa12.95□□□□□ -0.34
SHTN1-201ENST00000260777 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
SHTN1-201ENST00000260777 C10orf126Q8N4M7 172 aa12.94□□□□□ -0.34
SHTN1-201ENST00000260777 SPTA1P02549 2419 aa12.94□□□□□ -0.34
SHTN1-201ENST00000260777 ZNF815PA8K554 130 aa12.94□□□□□ -0.34
SHTN1-201ENST00000260777 GFRA4Q9GZZ7 299 aa12.94□□□□□ -0.34
SHTN1-201ENST00000260777 SIGLEC9Q9Y336 463 aa12.94□□□□□ -0.34
SHTN1-201ENST00000260777 SYS1-DBNDD2H3BUS1 97 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 SAMD5Q5TGI4 173 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 MPDZO75970 2070 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 MDC1Q14676 2089 aaKnown RBP12.93□□□□□ -0.34
SHTN1-201ENST00000260777 TMEM262E9PQX1 116 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 CACNA1DQ01668 2161 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 C15orf32Q32M92 178 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 TRAV41A0A0B4J266 112 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 BUB1B-PAK6H3BSN5 160 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 NPFFR1Q9GZQ6 430 aa12.93□□□□□ -0.34
SHTN1-201ENST00000260777 TRGV11A0A075B6L2 103 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 SH2D1AO60880 128 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 PLXNA2O75051 1894 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 RPL15P61313 204 aaKnown RBP12.92□□□□□ -0.34
SHTN1-201ENST00000260777 LCN12Q6JVE5 192 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 JMJD8Q96S16 334 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 COL4A6Q14031 1691 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 CNTFRP26992 372 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 ZNF524Q96C55 264 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 SRSF8Q9BRL6 282 aaKnown RBP12.92□□□□□ -0.34
SHTN1-201ENST00000260777 YAE1D1Q9NRH1 226 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 WISP1O95388 367 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 NCR2O95944 276 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 C5orf64Q2M2E5 130 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.92□□□□□ -0.34
SHTN1-201ENST00000260777 M0R1W7 72 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 TGFAP01135 160 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 VMO1Q7Z5L0 202 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 LIME1Q9H400 295 aa12.92□□□□□ -0.34
SHTN1-201ENST00000260777 GUSBP1Q15486 140 aa12.91□□□□□ -0.34
SHTN1-201ENST00000260777 LURAP1LQ8IV03 231 aa12.91□□□□□ -0.34
SHTN1-201ENST00000260777 hDV102S1A0JD36 115 aa12.91□□□□□ -0.34
SHTN1-201ENST00000260777 PRSS22Q9GZN4 317 aa12.91□□□□□ -0.34
SHTN1-201ENST00000260777 A8MWP6 167 aa12.91□□□□□ -0.34
SHTN1-201ENST00000260777 ZNF138P52744 262 aa12.91□□□□□ -0.34
SHTN1-201ENST00000260777 Q86TA4 180 aa12.91□□□□□ -0.34
SHTN1-201ENST00000260777 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
SHTN1-201ENST00000260777 MGAMO43451 1857 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 PF4P02776 101 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 TMEM14BQ9NUH8 114 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 IGKV1-16P04430 117 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 THADAQ6YHU6 1953 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 TDGF1P3P51864 188 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 C9orf139Q6ZV77 190 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 SPACA3Q8IXA5 215 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 NCOR1P1Q9H4R4 102 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 PROK2Q9HC23 129 aa12.9□□□□□ -0.34
SHTN1-201ENST00000260777 ZNF726P1Q15940 193 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 KIR3DL3Q8N743 410 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 NDUFS6O75380 124 aaKnown RBP12.89□□□□□ -0.35
SHTN1-201ENST00000260777 GTSCR1Q86UQ5 136 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 DMRTC2Q8IXT2 367 aaPredicted RBP12.89□□□□□ -0.35
SHTN1-201ENST00000260777 TRAV8-2A0A0B4J237 113 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 VDAC2P45880 294 aaPredicted RBP12.89□□□□□ -0.35
SHTN1-201ENST00000260777 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 A0A0G2JNJ9 132 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 IGLV3-1P01715 115 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 Q9UFV3 132 aa12.89□□□□□ -0.35
SHTN1-201ENST00000260777 TRBV7-1A0A0A6YYK4 115 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 MLANAQ16655 118 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 POLR3KQ9Y2Y1 108 aaPredicted RBP12.88□□□□□ -0.35
SHTN1-201ENST00000260777 SNRNP200O75643 2136 aaKnown RBP12.88□□□□□ -0.35
SHTN1-201ENST00000260777 IGKV1-39P01597 117 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 IGHV2-5P01817 119 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 IGKV1D-39P04432 117 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 PLNP26678 52 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 GAGE13Q4V321 117 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 MPV17L2Q567V2 206 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 ZNF474Q6S9Z5 364 aaPredicted RBP12.88□□□□□ -0.35
SHTN1-201ENST00000260777 SIGMAR1Q99720 223 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 ZDBF2Q9HCK1 2354 aa12.88□□□□□ -0.35
SHTN1-201ENST00000260777 CD28P10747 220 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms