RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SEPSECSQ9HD40 501 aaKnown RBP15.47■□□□□ 0.07
PTPRE-201ENST00000254667 NPIPB5A8MRT5 1133 aa15.47■□□□□ 0.07
PTPRE-201ENST00000254667 TOMM40O96008 361 aa15.47■□□□□ 0.07
PTPRE-201ENST00000254667 CEACAM8P31997 349 aaPredicted RBP15.47■□□□□ 0.07
PTPRE-201ENST00000254667 FOXL1Q12952 345 aa15.47■□□□□ 0.07
PTPRE-201ENST00000254667 LINC00477Q96M19 166 aa15.47■□□□□ 0.07
PTPRE-201ENST00000254667 CD33P20138 364 aa15.46■□□□□ 0.07
PTPRE-201ENST00000254667 C11orf44Q8N8P7 122 aa15.46■□□□□ 0.07
PTPRE-201ENST00000254667 PROK2Q9HC23 129 aa15.46■□□□□ 0.07
PTPRE-201ENST00000254667 LYL1P12980 280 aa15.46■□□□□ 0.07
PTPRE-201ENST00000254667 DPM2O94777 84 aa15.46■□□□□ 0.06
PTPRE-201ENST00000254667 DTX1Q86Y01 620 aa15.46■□□□□ 0.06
PTPRE-201ENST00000254667 IGKV2-40A0A087WW87 121 aaPredicted RBP15.45■□□□□ 0.06
PTPRE-201ENST00000254667 RBMY1BA6NDE4 496 aaKnown RBP15.45■□□□□ 0.06
PTPRE-201ENST00000254667 RBMY1EA6NEQ0 496 aaKnown RBP15.45■□□□□ 0.06
PTPRE-201ENST00000254667 IGKV2D-40P01614 121 aaPredicted RBP15.45■□□□□ 0.06
PTPRE-201ENST00000254667 RBMY1DP0C7P1 496 aaKnown RBP15.45■□□□□ 0.06
PTPRE-201ENST00000254667 RBMY1A1P0DJD3 496 aaKnown RBP15.45■□□□□ 0.06
PTPRE-201ENST00000254667 RBMY1CP0DJD4 496 aa15.45■□□□□ 0.06
PTPRE-201ENST00000254667 C15orf62A8K5M9 175 aa15.45■□□□□ 0.06
PTPRE-201ENST00000254667 RNASE2P10153 161 aaKnown RBP15.45■□□□□ 0.06
PTPRE-201ENST00000254667 MALP21145 153 aa15.45■□□□□ 0.06
PTPRE-201ENST00000254667 PPIFP30405 207 aaKnown RBP15.45■□□□□ 0.06
PTPRE-201ENST00000254667 SRD5A1P18405 259 aa15.45■□□□□ 0.06
PTPRE-201ENST00000254667 NTF4P34130 210 aa15.45■□□□□ 0.06
PTPRE-201ENST00000254667 SAA4P35542 130 aa15.45■□□□□ 0.06
PTPRE-201ENST00000254667 C1QL4Q86Z23 238 aa15.45■□□□□ 0.06
PTPRE-201ENST00000254667 EXOC3-AS1Q8N2X6 119 aa15.45■□□□□ 0.06
PTPRE-201ENST00000254667 PIP4P2Q8N4L2 257 aa15.44■□□□□ 0.06
PTPRE-201ENST00000254667 GHRHP01286 108 aa15.44■□□□□ 0.06
PTPRE-201ENST00000254667 UBE2E1P51965 193 aa15.44■□□□□ 0.06
PTPRE-201ENST00000254667 KLF17Q5JT82 389 aaPredicted RBP15.43■□□□□ 0.06
PTPRE-201ENST00000254667 LINC01551Q86U37 167 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 ZNF581Q9P0T4 197 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BKO60814 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BJP06899 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BOP23527 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BBP33778 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BDP58876 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BCP62807 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST2H2BEQ16778 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BHQ93079 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BNQ99877 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 HIST1H2BMQ99879 126 aa15.43■□□□□ 0.06
PTPRE-201ENST00000254667 MSMBP08118 114 aa15.42■□□□□ 0.06
PTPRE-201ENST00000254667 SMPXQ9UHP9 88 aa15.42■□□□□ 0.06
PTPRE-201ENST00000254667 MED12Q93074 2177 aa15.42■□□□□ 0.06
PTPRE-201ENST00000254667 TNFSF13O75888 250 aa15.42■□□□□ 0.06
PTPRE-201ENST00000254667 CD28P10747 220 aa15.42■□□□□ 0.06
PTPRE-201ENST00000254667 PRR30Q53SZ7 412 aaPredicted RBP15.42■□□□□ 0.06
PTPRE-201ENST00000254667 ZNF562Q6V9R5 426 aa15.42■□□□□ 0.06
PTPRE-201ENST00000254667 PRADC1Q9BSG0 188 aa15.42■□□□□ 0.06
PTPRE-201ENST00000254667 RFNGQ9Y644 331 aa15.42■□□□□ 0.06
PTPRE-201ENST00000254667 SP5Q6BEB4 398 aaPredicted RBP15.41■□□□□ 0.06
PTPRE-201ENST00000254667 C5orf24Q7Z6I8 188 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 NIT1Q86X76 327 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 RNF166Q96A37 237 aaPredicted RBP15.41■□□□□ 0.06
PTPRE-201ENST00000254667 TSC2P49815 1807 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 TRAV9-2A0A087WT02 112 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 NBL1P41271 181 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 ZNF415Q09FC8 603 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 PSG3Q16557 428 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 RCHY1Q96PM5 261 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 CA1P00915 261 aaPredicted RBP15.41■□□□□ 0.06
PTPRE-201ENST00000254667 RNF182Q8N6D2 247 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 C1QTNF4Q9BXJ3 329 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 TRBV7-9A0A0J9YWB2 115 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 A6NNC1 897 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 SNAI2O43623 268 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 ST6GALNAC6Q969X2 333 aa15.41■□□□□ 0.06
PTPRE-201ENST00000254667 CHTOPQ9Y3Y2 248 aaKnown RBP15.41■□□□□ 0.06
PTPRE-201ENST00000254667 LY6HO94772 140 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 CRPP02741 224 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 ZNF688P0C7X2 276 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 IFI27L1Q96BM0 104 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 TICRRQ7Z2Z1 1910 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 PI4KAP42356 2102 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 LCN12Q6JVE5 192 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 RNF114Q9Y508 228 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 SRRM4A7MD48 611 aaKnown RBP15.4■□□□□ 0.06
PTPRE-201ENST00000254667 IGKV1-16P04430 117 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 PDE6HQ13956 83 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 PIP4P1Q86T03 277 aa15.4■□□□□ 0.06
PTPRE-201ENST00000254667 ERVK11-1P61568 191 aa15.39■□□□□ 0.05
PTPRE-201ENST00000254667 SLC25A2Q9BXI2 301 aa15.39■□□□□ 0.05
PTPRE-201ENST00000254667 DAZ1Q9NQZ3 744 aaKnown RBP15.39■□□□□ 0.05
PTPRE-201ENST00000254667 A0A0G2JRQ6 117 aa15.39■□□□□ 0.05
PTPRE-201ENST00000254667 LAGE3Q14657 143 aa15.39■□□□□ 0.05
PTPRE-201ENST00000254667 AKAP6Q13023 2319 aa15.39■□□□□ 0.05
PTPRE-201ENST00000254667 CHCHD5Q9BSY4 110 aa15.39■□□□□ 0.05
PTPRE-201ENST00000254667 EVI2AP22794 236 aa15.39■□□□□ 0.05
PTPRE-201ENST00000254667 ANAPC10Q9UM13 185 aa15.39■□□□□ 0.05
PTPRE-201ENST00000254667 APOMO95445 188 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 LHFPL4Q7Z7J7 247 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 KIR3DL3Q8N743 410 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 FAM110DQ8TAY7 271 aaPredicted RBP15.38■□□□□ 0.05
PTPRE-201ENST00000254667 RHPN1-AS1Q9BWJ2 59 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 GPR179Q6PRD1 2367 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 ADARB2-AS1A8MUL3 147 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms