RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 H3BTX0 84 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 CCL21O00585 134 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 HYPMO75409 117 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 ZNF324O75467 553 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-202ENST00000244303 RASL11AQ6T310 242 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 PPP1R27Q86WC6 154 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 BORCS7Q96B45 105 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 ZFP30Q9Y2G7 519 aa11.48□□□□□ -0.57
HIF3A-202ENST00000244303 LRBAP50851 2863 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 HIGD1CA8MV81 97 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 TEX22C9J3V5 150 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 TCF21O43680 179 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 HIST1H1EP10412 219 aaKnown RBP11.47□□□□□ -0.57
HIF3A-202ENST00000244303 GP9P14770 177 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 NTF3P20783 257 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
HIF3A-202ENST00000244303 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
HIF3A-202ENST00000244303 KLRB1Q12918 225 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 C18orf32Q8TCD1 76 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 TSKUQ8WUA8 353 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 CHRDL1Q9BU40 450 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 CLEC7AQ9BXN2 247 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 F11RQ9Y624 299 aaKnown RBP11.47□□□□□ -0.57
HIF3A-202ENST00000244303 COX7A1P24310 79 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 FBXL19-AS1Q494R0 122 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 FAM19A2Q8N3H0 131 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 WNT10AQ9GZT5 417 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 FBXL15Q9H469 300 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 KLF12Q9Y4X4 402 aa11.47□□□□□ -0.57
HIF3A-202ENST00000244303 DCHS2Q6V1P9 2916 aa11.46□□□□□ -0.57
HIF3A-202ENST00000244303 ABCA1O95477 2261 aa11.46□□□□□ -0.57
HIF3A-202ENST00000244303 NIT1Q86X76 327 aa11.46□□□□□ -0.57
HIF3A-202ENST00000244303 C8orf46Q8TAG6 207 aa11.46□□□□□ -0.57
HIF3A-202ENST00000244303 GPR82Q96P67 336 aa11.46□□□□□ -0.57
HIF3A-202ENST00000244303 VWC2LB2RUY7 222 aa11.46□□□□□ -0.58
HIF3A-202ENST00000244303 CTRLP40313 264 aa11.46□□□□□ -0.58
HIF3A-202ENST00000244303 C21orf62-AS1Q17RA5 79 aa11.46□□□□□ -0.58
HIF3A-202ENST00000244303 MLST8Q9BVC4 326 aa11.46□□□□□ -0.58
HIF3A-202ENST00000244303 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.58
HIF3A-202ENST00000244303 PPIAL4CA0A0B4J2A2 164 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 C3orf79P0CE67 100 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 PPIAL4GP0DN37 164 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 CAMPP49913 170 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 PLP1P60201 277 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 LINC00322Q6ZN03 302 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-202ENST00000244303 KLHDC1Q8N7A1 406 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 RPEQ96AT9 228 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 Q9H3A6 140 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 RELNP78509 3460 aa11.45□□□□□ -0.58
HIF3A-202ENST00000244303 GPR6P46095 362 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-202ENST00000244303 LYZP61626 148 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 PAX2Q02962 417 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 ATOH7Q8N100 152 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 MUC15Q8N387 334 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 SRSF12Q8WXF0 261 aaKnown RBP11.44□□□□□ -0.58
HIF3A-202ENST00000244303 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
HIF3A-202ENST00000244303 LAMTOR2Q9Y2Q5 125 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 TOMM40O96008 361 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 TCRAP04437 139 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 IGLC2P0DOY2 106 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 IGLC3P0DOY3 106 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 PSG1P11464 419 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 TCF24Q7RTU0 167 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 STPG4Q8N801 248 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 FMC1Q96HJ9 113 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
HIF3A-202ENST00000244303 LTAP01374 205 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 IGLC1P0CG04 106 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 TPRP12270 2363 aaKnown RBP11.43□□□□□ -0.58
HIF3A-202ENST00000244303 CDSNQ15517 529 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 PRR31Q5SQ13 230 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 RPP21Q9H633 154 aaKnown RBP11.43□□□□□ -0.58
HIF3A-202ENST00000244303 A0A1B0GXF2 115 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 C20orf202A1L168 122 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 ADORA2A-AS1P86434 159 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 PLGLAQ15195 96 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 ATP5L2Q7Z4Y8 100 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 ARHGAP32A7KAX9 2087 aa11.43□□□□□ -0.58
HIF3A-202ENST00000244303 I3L2K1 104 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 OR2J3O76001 311 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 ZNF672Q499Z4 452 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-202ENST00000244303 ALKBH7Q9BT30 221 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-202ENST00000244303 PRSS22Q9GZN4 317 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 C19orf71A6NCJ1 209 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 RBP4P02753 201 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 PCP4P48539 62 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 OR2D3Q8NGH3 330 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 SLC25A39Q9BZJ4 359 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-202ENST00000244303 ONECUT1Q9UBC0 465 aa11.42□□□□□ -0.58
HIF3A-202ENST00000244303 TRAV8-1A0A0A6YYK1 113 aa11.41□□□□□ -0.58
HIF3A-202ENST00000244303 LY6LH3BQJ8 138 aa11.41□□□□□ -0.58
HIF3A-202ENST00000244303 P01737 135 aa11.41□□□□□ -0.58
HIF3A-202ENST00000244303 KLF5Q13887 457 aaPredicted RBP11.41□□□□□ -0.58
HIF3A-202ENST00000244303 GTSF1Q8WW33 167 aa11.41□□□□□ -0.58
HIF3A-202ENST00000244303 RASL11BQ9BPW5 248 aa11.41□□□□□ -0.58
HIF3A-202ENST00000244303 IGF2RP11717 2491 aa11.41□□□□□ -0.58
HIF3A-202ENST00000244303 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms