RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 WNT10AQ9GZT5 417 aa9.6□□□□□ -0.87
SEC61A1-201ENST00000243253 UQCR10Q9UDW1 63 aa9.6□□□□□ -0.87
SEC61A1-201ENST00000243253 LOC102724200A0A096LPH7 203 aaPredicted RBP9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 FAM181BA6NEQ2 426 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 DLL1O00548 723 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 GPR6P46095 362 aaPredicted RBP9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 MFAP2P55001 183 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 TAS2R45P59539 299 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 RITA1Q96K30 269 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 ZNF355PQ9NSJ1 428 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 LINC00312Q9Y6C7 94 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 IGHV2-26A0A0B4J1V2 119 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 TOMM40O96008 361 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 COL5A1-AS1Q5SY13 56 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 LCN12Q6JVE5 192 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 TMEM167AQ8TBQ9 72 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 GTSF1Q8WW33 167 aa9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 AMMECR1Q9Y4X0 333 aaPredicted RBP9.59□□□□□ -0.87
SEC61A1-201ENST00000243253 A0A1W2PN81 502 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 TCRBV4S1A1TA0A5B7 111 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 PEX7O00628 323 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 APOHP02749 345 aaPredicted RBP9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 TSPOP30536 169 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 DLX6P56179 175 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 TMEM108Q6UXF1 575 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 ZNF835Q9Y2P0 537 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 USF1P22415 310 aaPredicted RBP9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 CNTFRP26992 372 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 GRNP28799 593 aaKnown RBP9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 C1RLQ9NZP8 487 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 LAMTOR2Q9Y2Q5 125 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 CNIH1O95406 144 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
SEC61A1-201ENST00000243253 COX7A2P2O60397 106 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 APOA2P02652 100 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 C1orf185Q5T7R7 199 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 PIP4P1Q86T03 277 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 C11orf42Q8N5U0 333 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 C8orf31Q8N9H6 132 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 RAB9BQ9NP90 201 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 ONECUT1Q9UBC0 465 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 NPIPB6E9PJ23 425 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 C16orf97H3BN30 126 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 CCL25O15444 150 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 Q71RC1 249 aaPredicted RBP9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 FLYWCH2Q96CP2 140 aaKnown RBP9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 LTAP01374 205 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 RBP4P02753 201 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 CSN3P07498 182 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 IGLL1P15814 213 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 RPL8P62917 257 aaKnown RBP9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 PAX2Q02962 417 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 RNF151Q2KHN1 245 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 KLF17Q5JT82 389 aaPredicted RBP9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 ATP5L2Q7Z4Y8 100 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 OR4A5Q8NH83 315 aa9.57□□□□□ -0.88
SEC61A1-201ENST00000243253 IGHV3OR16-13A0A075B7E8 117 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 TMSB15BA0A087X1C1 80 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 IGHV3-74A0A0B4J1X5 117 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 GP9P14770 177 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 NKX6-3A6NJ46 265 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 HIGD1CA8MV81 97 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 M0QZ24 198 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 IGLV2-11P01706 119 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 CRYGBP07316 175 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 FOXA3P55318 350 aaPredicted RBP9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 TMEM200BQ69YZ2 307 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 FAM71F2Q6NXP2 309 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 MUC15Q8N387 334 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 LINC00311Q8N616 119 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 ORAOV1Q8WV07 137 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 MCRIP2Q9BUT9 160 aaKnown RBP9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 NDUFB3O43676 98 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 NUP37Q8NFH4 326 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 PAXXQ9BUH6 204 aa9.56□□□□□ -0.88
SEC61A1-201ENST00000243253 A0A0G2JNJ9 132 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 A0A1W2PPI3 338 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 hADV38S2A0JD32 116 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 IGLC7A0M8Q6 106 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 LYZP61626 148 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 ZNF430Q9H8G1 570 aaPredicted RBP9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 TP73-AS1Q9UF72 201 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 Q9UFV3 132 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 EPG5Q9HCE0 2579 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 Q6ZVH6 145 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 OR2D3Q8NGH3 330 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 EPDR1Q9UM22 224 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 SSUH2Q9Y2M2 353 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 ARF6P62330 175 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 PMCHL1Q16048 86 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 C10orf113Q5VZT2 155 aa9.55□□□□□ -0.88
SEC61A1-201ENST00000243253 BORCS7Q96B45 105 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms