RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 NRGNQ92686 78 aa10.47□□□□□ -0.73
MSH2-201ENST00000233146 DLX4Q92988 240 aaPredicted RBP10.47□□□□□ -0.73
MSH2-201ENST00000233146 AGRNO00468 2067 aa10.47□□□□□ -0.73
MSH2-201ENST00000233146 WI2-2373I1.2A0A1W2PRP0 233 aa10.47□□□□□ -0.73
MSH2-201ENST00000233146 C12orf77C9JDV5 145 aa10.47□□□□□ -0.73
MSH2-201ENST00000233146 HBDP02042 147 aa10.47□□□□□ -0.73
MSH2-201ENST00000233146 MYCNOSP40205 109 aa10.47□□□□□ -0.73
MSH2-201ENST00000233146 GNG5P63218 68 aa10.47□□□□□ -0.73
MSH2-201ENST00000233146 CFHR5Q9BXR6 569 aa10.47□□□□□ -0.73
MSH2-201ENST00000233146 NDUFS7O75251 213 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 FCN3O75636 299 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 MOSP00540 346 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 CCL5P13501 91 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 HLA-DRB4P13762 266 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 MORN3Q6PF18 240 aaPredicted RBP10.46□□□□□ -0.73
MSH2-201ENST00000233146 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 HLA-DRB4X5D2U9 266 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 CHD9Q3L8U1 2897 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 CEP192Q8TEP8 1941 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 ZNF542PQ5EBM4 170 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 MOB3BQ86TA1 216 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 FADS6Q8N9I5 356 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 TMEM158Q8WZ71 300 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 SGK494Q96LW2 274 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 FAM234AQ9H0X4 552 aa10.46□□□□□ -0.73
MSH2-201ENST00000233146 DLL1O00548 723 aa10.46□□□□□ -0.74
MSH2-201ENST00000233146 SCGB2A1O75556 95 aa10.46□□□□□ -0.74
MSH2-201ENST00000233146 PYYP10082 97 aa10.46□□□□□ -0.74
MSH2-201ENST00000233146 COL9A1P20849 921 aa10.46□□□□□ -0.74
MSH2-201ENST00000233146 TTC32Q5I0X7 151 aa10.46□□□□□ -0.74
MSH2-201ENST00000233146 VKORC1L1Q8N0U8 176 aa10.46□□□□□ -0.74
MSH2-201ENST00000233146 FOXB1Q99853 325 aa10.46□□□□□ -0.74
MSH2-201ENST00000233146 FOXF2Q12947 444 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 RUNX3Q13761 415 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 NFAM1Q8NET5 270 aaPredicted RBP10.45□□□□□ -0.74
MSH2-201ENST00000233146 RAB9BQ9NP90 201 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 EPDR1Q9UM22 224 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 LINC01548A6NM66 108 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 FCGR3BO75015 233 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 Q6Q795 121 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 NGFP01138 241 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 GFERP55789 205 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 YPEL5P62699 121 aa10.45□□□□□ -0.74
MSH2-201ENST00000233146 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
MSH2-201ENST00000233146 A0A1B0GUT8 65 aa10.44□□□□□ -0.74
MSH2-201ENST00000233146 FXYD7P58549 80 aa10.44□□□□□ -0.74
MSH2-201ENST00000233146 KLF17Q5JT82 389 aaPredicted RBP10.44□□□□□ -0.74
MSH2-201ENST00000233146 SLC25A48Q6ZT89 311 aaKnown RBP10.44□□□□□ -0.74
MSH2-201ENST00000233146 PAXXQ9BUH6 204 aa10.44□□□□□ -0.74
MSH2-201ENST00000233146 TMEM126AQ9H061 195 aa10.44□□□□□ -0.74
MSH2-201ENST00000233146 LOC389332A0A1B0GUA5 103 aa10.44□□□□□ -0.74
MSH2-201ENST00000233146 EVI2AP22794 236 aa10.44□□□□□ -0.74
MSH2-201ENST00000233146 MEIG1Q5JSS6 88 aa10.44□□□□□ -0.74
MSH2-201ENST00000233146 ZNHIT1O43257 154 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 WIPF1O43516 503 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 C1orf61Q13536 156 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 SLC22A18ASQ8N1D0 253 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 FBXL15Q9H469 300 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 FER1L5A0AVI2 2057 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 TRAV4A0A0B4J268 109 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 PRR30Q53SZ7 412 aaPredicted RBP10.43□□□□□ -0.74
MSH2-201ENST00000233146 ZNF766Q5HY98 468 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 FXYD5Q96DB9 178 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 PROP1O75360 226 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 ARMS2P0C7Q2 107 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 ERVK-16P61578 105 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 DEFB103AP81534 67 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 RIGQ13278 110 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 ADIPOQQ15848 244 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 SBSPONQ8IVN8 264 aa10.43□□□□□ -0.74
MSH2-201ENST00000233146 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 MYOD1P15172 320 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 MBNL2Q5VZF2 373 aaKnown RBP10.42□□□□□ -0.74
MSH2-201ENST00000233146 U3KQK5 164 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 DYSFO75923 2080 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 TRAV25A0A0B4J276 109 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 OOEPA6NGQ2 149 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 C15orf61A6NNL5 157 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 J3QT63 122 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 OR13H1Q8NG92 308 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 RASL10AQ92737 203 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 F5P12259 2224 aa10.42□□□□□ -0.74
MSH2-201ENST00000233146 TMEM30CPA0ZSE6 113 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 SS18L1O75177 396 aaPredicted RBP10.41□□□□□ -0.74
MSH2-201ENST00000233146 SNCGO76070 127 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 TMEM196Q5HYL7 178 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 AKIRIN1Q9H9L7 192 aaPredicted RBP10.41□□□□□ -0.74
MSH2-201ENST00000233146 KNTC1P50748 2209 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 HSPE1P61604 102 aaKnown RBP10.41□□□□□ -0.74
MSH2-201ENST00000233146 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.41□□□□□ -0.74
MSH2-201ENST00000233146 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 FMC1Q96HJ9 113 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 SRXN1Q9BYN0 137 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 MDFICQ9P1T7 246 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 HOXA3O43365 443 aaPredicted RBP10.41□□□□□ -0.74
MSH2-201ENST00000233146 CRLF1O75462 422 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 ASIPP42127 132 aa10.41□□□□□ -0.74
MSH2-201ENST00000233146 PSMB2P49721 201 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms