RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 ATRXP46100 2492 aa6.43□□□□□ -1.38
NANOG-201ENST00000229307 SNRNP200O75643 2136 aaKnown RBP6.43□□□□□ -1.38
NANOG-201ENST00000229307 A0A087X0M5 115 aa6.43□□□□□ -1.38
NANOG-201ENST00000229307 CENPVL3A0A0U1RRI6 287 aa6.43□□□□□ -1.38
NANOG-201ENST00000229307 A0A1B0GX30 115 aa6.43□□□□□ -1.38
NANOG-201ENST00000229307 RNASE2P10153 161 aaKnown RBP6.43□□□□□ -1.38
NANOG-201ENST00000229307 C9orf66Q5T8R8 295 aa6.43□□□□□ -1.38
NANOG-201ENST00000229307 ZNF705AQ6ZN79 300 aaPredicted RBP6.43□□□□□ -1.38
NANOG-201ENST00000229307 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
NANOG-201ENST00000229307 TRANK1O15050 2925 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 ZNF25P17030 456 aaPredicted RBP6.42□□□□□ -1.38
NANOG-201ENST00000229307 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
NANOG-201ENST00000229307 TREML4Q6UXN2 200 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 CBLN2Q8IUK8 224 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 AURKAIP1Q9NWT8 199 aaPredicted RBP6.42□□□□□ -1.38
NANOG-201ENST00000229307 FAM3BP58499 235 aaPredicted RBP6.42□□□□□ -1.38
NANOG-201ENST00000229307 ZNF506Q5JVG8 444 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 Q6ZSR3 168 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 DPH3Q96FX2 82 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 MRPL27Q9P0M9 148 aaKnown RBP6.42□□□□□ -1.38
NANOG-201ENST00000229307 EPDR1Q9UM22 224 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 A0A1W2PPI3 338 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 C7orf77A4D0Y5 90 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 M0R381 172 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 CD81P60033 236 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 LYPD1Q8N2G4 141 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 FAM24BQ8N5W8 94 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 GLMPQ8WWB7 406 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 PRADC1Q9BSG0 188 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 TMEM191AQ9H0A3 160 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 EPG5Q9HCE0 2579 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 ZNF688P0C7X2 276 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 FABP4P15090 132 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 ZNF415Q09FC8 603 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 ACTL10Q5JWF8 245 aa6.42□□□□□ -1.38
NANOG-201ENST00000229307 CHD7Q9P2D1 2997 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.41□□□□□ -1.38
NANOG-201ENST00000229307 IGHV4-38-2P0DP08 117 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 C1orf194Q5T5A4 169 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 TMEM14EPQ6UXP3 125 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 PARLQ9H300 379 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 NDUFA4L2Q9NRX3 87 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 TRBV9A0A0B4J1U6 114 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 MPTX1A8MV57 137 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 NUDT3O95989 172 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 RPL15P61313 204 aaKnown RBP6.41□□□□□ -1.38
NANOG-201ENST00000229307 TMEM14BQ9NUH8 114 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 ZNF581Q9P0T4 197 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 HEATR5AQ86XA9 2040 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 PHF3Q92576 2039 aaKnown RBP6.41□□□□□ -1.38
NANOG-201ENST00000229307 FSTL3O95633 263 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 MST1LQ2TV78 715 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 PDZD11Q5EBL8 140 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 SPATA31B1PQ5VZV4 182 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 FER1L6-AS1Q8NA97 138 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 ANAPC10Q9UM13 185 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 PSG8Q9UQ74 426 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 IGKV1-6A0A0C4DH72 117 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 CLPSL1A2RUU4 121 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 G3V318 75 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 BTCP35070 178 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 Q1RN00 199 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 ATRAIDQ6UW56 229 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 TTC9CQ8N5M4 171 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 C1orf147Q96MC9 270 aaPredicted RBP6.41□□□□□ -1.38
NANOG-201ENST00000229307 RPP21Q9H633 154 aaKnown RBP6.41□□□□□ -1.38
NANOG-201ENST00000229307 NRN1Q9NPD7 142 aa6.41□□□□□ -1.38
NANOG-201ENST00000229307 DLX1P56177 255 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 ZNF841Q6ZN19 808 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 RFNGQ9Y644 331 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 TMEM50AO95807 157 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 LGALS1P09382 135 aaKnown RBP6.4□□□□□ -1.38
NANOG-201ENST00000229307 PTTG1IPP53801 180 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 ELOBQ15370 118 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 TBX15Q96SF7 602 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 GGTLC1Q9BX51 225 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 USF3Q68DE3 2245 aa6.4□□□□□ -1.38
NANOG-201ENST00000229307 NBASA2RRP1 2371 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 TRAV34A0A0B4J273 112 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 TMEM89A2RUT3 159 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 CNTFRP26992 372 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 HBBP68871 147 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 SFRP2Q96HF1 295 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 ZNRD1Q9P1U0 126 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 CHD8Q9HCK8 2581 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 TRBV20OR9-2A0A075B6H5 130 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 COPS9Q8WXC6 57 aa6.4□□□□□ -1.39
NANOG-201ENST00000229307 LOC389332A0A1B0GUA5 103 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 CCL24O00175 119 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 ZNF138P52744 262 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 NDPQ00604 133 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 ALKBH7Q9BT30 221 aaPredicted RBP6.39□□□□□ -1.39
NANOG-201ENST00000229307 ARID1AO14497 2285 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 WISP2O76076 250 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 PDE6HQ13956 83 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 TCTEX1D4Q5JR98 221 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 REC114Q7Z4M0 266 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 CXorf65A6NEN9 183 aa6.39□□□□□ -1.39
NANOG-201ENST00000229307 PMS2P5A8MQ11 134 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms