RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 TMEM177Q53S58 311 aa12.66□□□□□ -0.38
SNAPC1-201ENST00000216294 TEX36Q5VZQ5 186 aa12.66□□□□□ -0.38
SNAPC1-201ENST00000216294 EXOC3-AS1Q8N2X6 119 aa12.66□□□□□ -0.38
SNAPC1-201ENST00000216294 CIARTQ8N365 385 aaPredicted RBP12.66□□□□□ -0.38
SNAPC1-201ENST00000216294 MRPL32Q9BYC8 188 aaKnown RBP12.66□□□□□ -0.38
SNAPC1-201ENST00000216294 GAL3ST2Q9H3Q3 398 aa12.66□□□□□ -0.38
SNAPC1-201ENST00000216294 EPDR1Q9UM22 224 aa12.66□□□□□ -0.38
SNAPC1-201ENST00000216294 C17orf100A8MU93 164 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 RPL19P84098 196 aaKnown RBP12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 GRAMD2BQ96HH9 432 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 LINC00574Q9H8X3 128 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 UQCR10Q9UDW1 63 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 ARL2-SNX15V9GYD0 113 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 ANKHD1Q8IWZ3 2542 aaKnown RBP12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 NKX6-3A6NJ46 265 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 COL5A1-AS1Q5SY13 56 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 TMEM167AQ8TBQ9 72 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 RAB9BQ9NP90 201 aa12.65□□□□□ -0.38
SNAPC1-201ENST00000216294 PPIAL4EA0A075B759 164 aa12.65□□□□□ -0.39
SNAPC1-201ENST00000216294 PPIAL4DF5H284 164 aa12.65□□□□□ -0.39
SNAPC1-201ENST00000216294 CSN3P07498 182 aa12.65□□□□□ -0.39
SNAPC1-201ENST00000216294 NBEAP1P0C6P0 100 aa12.65□□□□□ -0.39
SNAPC1-201ENST00000216294 PPIAL4FP0DN26 164 aa12.65□□□□□ -0.39
SNAPC1-201ENST00000216294 SSX8Q7RTT4 187 aa12.65□□□□□ -0.39
SNAPC1-201ENST00000216294 CACNG8Q8WXS5 425 aa12.65□□□□□ -0.39
SNAPC1-201ENST00000216294 C17orf77Q96MU5 243 aa12.65□□□□□ -0.39
SNAPC1-201ENST00000216294 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
SNAPC1-201ENST00000216294 FAM90A27PA6NNH2 459 aa12.64□□□□□ -0.39
SNAPC1-201ENST00000216294 C19orf24Q9BVV8 132 aa12.64□□□□□ -0.39
SNAPC1-201ENST00000216294 CHD8Q9HCK8 2581 aa12.64□□□□□ -0.39
SNAPC1-201ENST00000216294 C2orf70A6NJV1 201 aa12.64□□□□□ -0.39
SNAPC1-201ENST00000216294 TSPOP30536 169 aa12.64□□□□□ -0.39
SNAPC1-201ENST00000216294 IGLC7A0M8Q6 106 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 BPIFB3P59826 476 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 NCOR1P1Q9H4R4 102 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 SHISA9B4DS77 424 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 TMEM178BH3BS89 294 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 LOXP28300 417 aaPredicted RBP12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 MYCNOSP40205 109 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 TCTAP57738 103 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 LYZP61626 148 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 WASHC3Q9Y3C0 194 aa12.63□□□□□ -0.39
SNAPC1-201ENST00000216294 COL6A6A6NMZ7 2263 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 NDUFB3O43676 98 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 BTF3P20290 206 aaKnown RBP12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 FOXE3Q13461 319 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 NCOR2Q9Y618 2525 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 E7EQL1 145 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 CCL25O15444 150 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 COX7A1P24310 79 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 KLRB1Q12918 225 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 Q9H3A6 140 aa12.62□□□□□ -0.39
SNAPC1-201ENST00000216294 MUC21A0A0G2JKD1 596 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 MUC21A0A140T8X8 626 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 TNFRSF1AP19438 455 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 CA7P43166 264 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 MUC21Q5SSG8 566 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 PRNTQ86SH4 94 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 BCL6BQ8N143 479 aaPredicted RBP12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 ZFP30Q9Y2G7 519 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 HIST1H1EP10412 219 aaKnown RBP12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 TPPP3Q9BW30 176 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 FBXL15Q9H469 300 aa12.61□□□□□ -0.39
SNAPC1-201ENST00000216294 CCL21O00585 134 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 CDSNQ15517 529 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 FAM120AOSQ5T036 256 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 GOLT1AQ6ZVE7 132 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 THAP8Q8NA92 274 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 OR8B3Q8NGG8 313 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 RALYQ9UKM9 306 aaKnown RBP12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 KLF17Q5JT82 389 aaPredicted RBP12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 FAM231DQ6ZW35 169 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 ZC2HC1AQ96GY0 325 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 GPR82Q96P67 336 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 SELENOKQ9Y6D0 94 aa12.6□□□□□ -0.39
SNAPC1-201ENST00000216294 IGHV1-24A0A0C4DH33 117 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 A0A1B0GXF2 115 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 SNAI2O43623 268 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 LY6HO94772 140 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 P01737 135 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 RBP4P02753 201 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 PSG1P11464 419 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 GP9P14770 177 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 LRRC10Q5BKY1 277 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 WIPF2Q8TF74 440 aaPredicted RBP12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 PERPQ96FX8 193 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 NGBQ9NPG2 151 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 IGHV1-8P0DP01 117 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 FXYD7P58549 80 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 RNASE6Q93091 150 aaKnown RBP12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 MLST8Q9BVC4 326 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 DYNLRB1Q9NP97 96 aa12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 MRPL27Q9P0M9 148 aaKnown RBP12.59□□□□□ -0.39
SNAPC1-201ENST00000216294 TCRAP04437 139 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms