RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 CCDC140Q96MF4 163 aa12.16□□□□□ -0.46
LAPTM4A-201ENST00000175091 ZNF580Q9UK33 172 aa12.16□□□□□ -0.46
LAPTM4A-201ENST00000175091 BRI3O95415 125 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 PPIFP30405 207 aaKnown RBP12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 USF2Q15853 346 aaPredicted RBP12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 TMEM241Q24JQ0 296 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 ZNF343Q6P1L6 599 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 ZNF414Q96IQ9 312 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 SHANK2-AS3Q9BTD1 123 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 CHRDL1Q9BU40 450 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 TUBA4BQ9H853 241 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 VPREB3Q9UKI3 123 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 FAM223BA6NKX1 122 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 AP4M1O00189 453 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 TSPAN4O14817 238 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 GPR183P32249 361 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 RPL23P62829 140 aaKnown RBP12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 LEMD1Q68G75 181 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 Q6YL49 198 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 Q6ZS46 218 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 FAM223AQ8IWN6 122 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 Q8WTZ3 238 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 MS4A10Q96PG2 267 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 PRDM13Q9H4Q3 707 aa12.15□□□□□ -0.46
LAPTM4A-201ENST00000175091 HECTD1Q9ULT8 2610 aa12.15□□□□□ -0.47
LAPTM4A-201ENST00000175091 TLN2Q9Y4G6 2542 aa12.14□□□□□ -0.47
LAPTM4A-201ENST00000175091 H3BUA1 57 aa12.14□□□□□ -0.47
LAPTM4A-201ENST00000175091 ADIRFQ15847 76 aa12.14□□□□□ -0.47
LAPTM4A-201ENST00000175091 EEF1AKMT3Q96AZ1 226 aa12.14□□□□□ -0.47
LAPTM4A-201ENST00000175091 NOL4LQ96MY1 436 aaPredicted RBP12.14□□□□□ -0.47
LAPTM4A-201ENST00000175091 ATP6V0BQ99437 205 aa12.14□□□□□ -0.47
LAPTM4A-201ENST00000175091 GAR1Q9NY12 217 aaKnown RBP12.14□□□□□ -0.47
LAPTM4A-201ENST00000175091 TMEM14CQ9P0S9 112 aa12.14□□□□□ -0.47
LAPTM4A-201ENST00000175091 TRBV20OR9-2A0A075B6H5 130 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 MYCNOSP40205 109 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 SUMO1P63165 101 aaKnown RBP12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 CFHR3Q02985 330 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 ZNF600Q6ZNG1 722 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 C15orf54Q8N8G6 183 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 C2CD4CQ8TF44 421 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 ISOC2Q96AB3 205 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 ELOVL1Q9BW60 279 aa12.13□□□□□ -0.47
LAPTM4A-201ENST00000175091 FASNP49327 2511 aaKnown RBP12.12□□□□□ -0.47
LAPTM4A-201ENST00000175091 SMAD7O15105 426 aaKnown RBP12.12□□□□□ -0.47
LAPTM4A-201ENST00000175091 LINC01551Q86U37 167 aa12.12□□□□□ -0.47
LAPTM4A-201ENST00000175091 COLCA2A8K830 154 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 C9JCJ5 164 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 TGOLN2O43493 480 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 TRGV3P03979 118 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 CLEC3BP05452 202 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 NBEAP1P0C6P0 100 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 CRYBB3P26998 211 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 ATP5G2Q06055 141 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 KRTAP1-1Q07627 177 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 RNF212Q495C1 297 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 CLEC19AQ6UXS0 136 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 S100A7AQ86SG5 101 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 ZNF329Q86UD4 541 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 ZFAND3Q9H8U3 227 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 TMEM242Q9NWH2 141 aa12.11□□□□□ -0.47
LAPTM4A-201ENST00000175091 ZNF98A6NK75 572 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 MRPS12O15235 138 aaKnown RBP12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 RPL35P42766 123 aaKnown RBP12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 TPPP2P59282 170 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 BPIFA4PQ86YQ2 179 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 BLNKQ8WV28 456 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 YPEL4Q96NS1 127 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 CXorf65A6NEN9 183 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 HOXA3O43365 443 aaPredicted RBP12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 IGLC2P0DOY2 106 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 HIST1H1EP10412 219 aaKnown RBP12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 TMEM95Q3KNT9 176 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 PRELID1Q9Y255 219 aa12.1□□□□□ -0.47
LAPTM4A-201ENST00000175091 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
LAPTM4A-201ENST00000175091 BMPR1BO00238 502 aa12.09□□□□□ -0.47
LAPTM4A-201ENST00000175091 HIST1H2BAQ96A08 127 aa12.09□□□□□ -0.47
LAPTM4A-201ENST00000175091 CTDSP1Q9GZU7 261 aa12.09□□□□□ -0.47
LAPTM4A-201ENST00000175091 ZNF586Q9NXT0 402 aa12.09□□□□□ -0.47
LAPTM4A-201ENST00000175091 RANP62826 216 aaKnown RBP12.08□□□□□ -0.48
LAPTM4A-201ENST00000175091 TOMM20LQ6UXN7 152 aa12.08□□□□□ -0.48
LAPTM4A-201ENST00000175091 USMG5Q96IX5 58 aa12.08□□□□□ -0.48
LAPTM4A-201ENST00000175091 RABAC1Q9UI14 185 aa12.08□□□□□ -0.48
LAPTM4A-201ENST00000175091 LY96Q9Y6Y9 160 aa12.08□□□□□ -0.48
LAPTM4A-201ENST00000175091 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 PEX7O00628 323 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 MT-ND4LP03901 98 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 IL17RELQ6ZVW7 336 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 OR4F17Q8NGA8 305 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 GNB4Q9HAV0 340 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 ANK3Q12955 4377 aaKnown RBP12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 TRBV19A0A075B6N1 114 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 H3BTX0 84 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 CLDN34H7C241 214 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 CD5LO43866 347 aa12.07□□□□□ -0.48
LAPTM4A-201ENST00000175091 PF4V1P10720 104 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms