RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Cyb5r3Q9DCN2 301 aaKnown RBP10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gm4791J3QQ14 102 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 P01668 110 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Pcp2P12660 120 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 PpicP30412 212 aaKnown RBP10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Fbxo46Q8BG80 603 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr365Q8VFT2 312 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Btg2Q04211 158 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 PnlipQ6P8U6 465 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Rbpms2Q8VC52 206 aaKnown RBP10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Defa7P50705 93 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr90Q0VEL5 310 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Prss48Q14B25 312 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Prodh2Q8VCZ9 456 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr816Q8VFU2 312 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Q9DAA3 117 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tnfsf15Q5UBV8 252 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 NgfrQ9Z0W1 417 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr432E9Q8M2 312 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 A630023A22RikJ3QP60 199 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 ClmQ7TSN2 230 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Samd10Q7TST3 202 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Ctag2Q9D9S4 219 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gpa33Q9JKA5 319 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 V1rd19Q3KNP5 305 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Defa23Q5G866 93 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 SowahbQ8BZW2 760 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Fam213bQ9DB60 201 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 P01809 118 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 AhsgP29699 345 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr25Q7TRD6 313 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Slc24a5Q8C261 501 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Lrp11Q8CB67 483 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Ighv5-17A0A075B5R1 117 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gm13762A2ATG2 311 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 1700034E13RikQ9D2T6 108 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Klhdc2Q4G5Y1 406 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Nupr1Q9WTK0 80 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Lhx9Q9WUH2 397 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr177E9Q7W1 309 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Rpl31P62900 125 aaKnown RBP10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Fam220aQ3ZN08 260 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 2810408A11RikQ6NSU2 435 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Zfp954Q7TNU5 416 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Atg4dQ8BGV9 474 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Dmrta1Q8CFG4 490 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Fam219aQ9D772 157 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 ThadaA8C756 1938 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gpbar1Q80SS6 329 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr355Q8VFP6 310 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Mrpl43Q99N89 183 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Vkorc1Q9CRC0 161 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Glipr1Q9CWG1 255 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Lrrk1Q3UHC2 2014 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Plcxd2B2RXA1 340 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tmem170bP86050 132 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 SepsecsQ6P6M7 504 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Arl14epQ8BIX3 276 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Slc25a45Q8CFJ7 288 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Dusp18Q8VE01 188 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1350Q8VF34 308 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Mlf1Q9QWV4 267 aa10.41□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr981Q8VEU2 310 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Cisd1Q91WS0 108 aaKnown RBP10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Arrdc2Q9D668 407 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Q9DAL9 119 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Dennd4aE9Q8V6 1869 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Vsig10l2A0A140LHF2 776 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gm35315A0A1B0GRI2 571 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1104A2AVB5 310 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Zc3h3Q8CHP0 950 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Errfi1Q99JZ7 461 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 1700008P02RikQ9DAJ8 175 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Cldn10Q9Z0S6 231 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 ShbQ6PD21 503 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr513Q8VFZ3 309 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Cep290Q6A078 2472 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Rps2-ps6A0A140T8L5 221 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Lax1Q8BHB3 407 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Ybx2Q9Z2C8 360 aaKnown RBP10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Sipa1l3G3X9J0 1776 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tmem95P0DJF3 176 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1259Q8VEZ1 309 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tmem101Q91VP7 257 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Vmn1r46Q9EQ45 309 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Dnajb12Q9QYI4 376 aaKnown RBP10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Prr32A2AFE9 284 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Samt3A2ARK7 233 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr178E9Q9T3 319 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 WtipQ7TQJ8 398 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Mbnl3Q8R003 342 aaKnown RBP10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr435Q8VFS3 313 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Fam162bQ9CX19 157 aa10.4□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gm37797A0A1D5RLC8 261 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Aqp7O54794 303 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Cnr2P47936 347 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr94Q6UAH0 386 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr761Q7TRJ0 323 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ogg1O08760 345 aa10.4□□□□□ -0.75
Trim56-201ENSMUST00000054384 Dhrs2Q149L0 282 aa10.4□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 64.7 ms