RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 TecrlQ8BFZ1 361 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Itgb4A2A863 1818 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 B4galt1P15535 399 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Khdc1aQ3UWR2 166 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Map1lc3aQ91VR7 121 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Mcpt9O35164 246 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 PpicP30412 212 aaKnown RBP14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Tcfl5Q32NY8 489 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Onecut2Q6XBJ3 505 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 HpxQ91X72 460 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Slc35b1P97858 322 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Q9CYS6 286 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 AplnrQ9WV08 377 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ccl1P10146 92 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr873Q8VFJ0 319 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 DapQ91XC8 102 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Shisal2bQ9D1Y9 158 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr926Q9EQ98 308 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ltbp1Q8CG19 1712 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Rnf212F6TQD1 307 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Wfdc6aQ3UW55 136 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr876Q7TRE4 310 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Zfp974Q3UVF6 752 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Slc52a3Q9D6X5 460 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ldlrad3A2AR95 345 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Q8C3I9 435 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Mrps18cQ8R2L5 143 aaKnown RBP14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 ApooQ9DCZ4 198 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Anapc1P53995 1944 aaKnown RBP14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Tex37Q9DAG4 180 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 P01664 111 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Asb10Q91ZT7 467 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Tmem183Q9JJB9 375 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Trip12G5E870 2025 aaKnown RBP14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Nat8f4G5E8L3 226 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Klk1b3P00756 261 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 P01796 113 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 P01797 113 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 P01799 113 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 MetrnQ8C1Q4 291 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Defa-rs1P17533 116 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm10277Q6R5C6 214 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 9230112D13RikQ9D260 137 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Fzr1Q9R1K5 493 aa14.48□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm14409A2ARR8 349 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ear1P97426 155 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Btf3Q64152 204 aaKnown RBP14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Utf1Q6J1H4 339 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Cd226Q8K4F0 333 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 D1Ertd622eQ8VEB3 207 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Cma2Q91VB1 246 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 LexmA2AVQ5 414 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Pcp2P12660 120 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Wnt10aP70701 417 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 PnlipQ6P8U6 465 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Usf3B2RUQ2 2221 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Rag2P21784 527 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Id4P41139 161 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr1362Q5SZZ8 308 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Vkorc1Q9CRC0 161 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Defa-rs10Q64263 91 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Dusp28Q8BTR5 163 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Glrx2Q923X4 156 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 9130008F23RikQ9D2Z6 181 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Adamtsl5D3Z689 485 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm20696H3BJN7 74 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Abhd17aQ99JW1 310 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ndufaf3Q9JKL4 185 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Igkv1-131A0A140T8M8 120 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm45783A0A1B0GT48 74 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Klri1B2KG20 248 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Sirt7Q8BKJ9 402 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Dusp18Q8VE01 188 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Psmg4P0C7N9 123 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Trappc1Q5NCF2 145 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr1260Q8VGN9 310 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Mmp17Q9R0S3 578 aa14.47□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Tstd1E9PY03 133 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 PlauP06869 433 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 AesP63002 197 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Plxnb1Q8CJH3 2119 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr983Q8VG90 315 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ap5s1Q9D742 170 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Trbv5A0A0B4J1G9 113 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gstp1P19157 210 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Prss45Q8K4I7 317 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ctag2Q9D9S4 219 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Akip1Q9JJR5 212 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Prr32A2AFE9 284 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Wnt1P04426 370 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Pdlim4P70271 330 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr1256Q8VGP1 306 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Cldn16Q925N4 235 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Fam213bQ9DB60 201 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Srrm4Q8BKA3 608 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Tmem101Q91VP7 257 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 SelenofQ9ERR7 162 aa14.46□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm44501A8R0T9 150 aa14.46□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Mpzl1Q3TEW6 270 aa14.46□□□□□ -0.1
Ccdc88a-201ENSMUST00000040182 Syngr3Q8R191 229 aa14.46□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms