RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 GTSF1Q8WW33 167 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 PGLYRP4Q96LB8 373 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 GPR82Q96P67 336 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 SSUH2Q9Y2M2 353 aa8.78□□□□□ -1
SNIP1-204ENST00000638725 PLXNB1O43157 2135 aa8.77□□□□□ -1
SNIP1-204ENST00000638725 IGHV1-69-2A0A0G2JMI3 117 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 A0A1W2PPI3 338 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 NKX6-3A6NJ46 265 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 IGLV2-23P01705 113 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 TNFSF4P23510 183 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 ZNF137PP52743 207 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 SUB1P53999 127 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNIP1-204ENST00000638725 UBE2V1Q13404 147 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 LEMD1Q68G75 181 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 PERPQ96FX8 193 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 MLST8Q9BVC4 326 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 COLQQ9Y215 455 aaPredicted RBP8.77□□□□□ -1.01
SNIP1-204ENST00000638725 IGHV3-21A0A0B4J1V1 117 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 IGHV1-24A0A0C4DH33 117 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 SLC25A17O43808 307 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 CA7P43166 264 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 HCP5Q6MZN7 132 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 OR10X1Q8NGY0 326 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 VSTM2AQ8TAG5 236 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 KLF12Q9Y4X4 402 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 FAM215AQ9Y5M1 114 aa8.77□□□□□ -1.01
SNIP1-204ENST00000638725 hDV102S1A0JD36 115 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 NBEAP1P0C6P0 100 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 APELAP0DMC3 54 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 FAM27E3Q08E93 113 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 DEFB109BQ30KR1 87 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 TMEM200BQ69YZ2 307 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 ERASQ7Z444 233 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 ARL6IP6Q8N6S5 226 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 RITA1Q96K30 269 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 A8MWL6 223 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 P01737 135 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 H1FXQ92522 213 aaKnown RBP8.76□□□□□ -1.01
SNIP1-204ENST00000638725 PRSS22Q9GZN4 317 aa8.76□□□□□ -1.01
SNIP1-204ENST00000638725 LOC105371242A0A075B767 164 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 FAM87AP0C7U9 286 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 Q71RC1 249 aaPredicted RBP8.75□□□□□ -1.01
SNIP1-204ENST00000638725 OR4A5Q8NH83 315 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 IGHV3-72A0A0B4J1Y9 119 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 LEPROTL1O95214 131 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 LTAP01374 205 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 CD40P25942 277 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 RBX1P62877 108 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 FBLN7Q53RD9 439 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 MPV17L2Q567V2 206 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 STXBP6Q8NFX7 210 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 MCRIP2Q9BUT9 160 aaKnown RBP8.75□□□□□ -1.01
SNIP1-204ENST00000638725 WASHC3Q9Y3C0 194 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 BOD1L1Q8NFC6 3051 aa8.75□□□□□ -1.01
SNIP1-204ENST00000638725 TCRAP04437 139 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 GP9P14770 177 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 ZNF138P52744 262 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 MEF2CQ06413 473 aaPredicted RBP8.74□□□□□ -1.01
SNIP1-204ENST00000638725 MRGPRG-AS1Q2M3A8 158 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 C5orf17Q8NAS9 161 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 SMIM12Q96EX1 92 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 LOXL4Q96JB6 756 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 Q9H3A6 140 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 GSX1Q9H4S2 264 aaPredicted RBP8.74□□□□□ -1.01
SNIP1-204ENST00000638725 SMG1Q96Q15 3661 aaKnown RBP8.74□□□□□ -1.01
SNIP1-204ENST00000638725 TRAV8-1A0A0A6YYK1 113 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 CRXO43186 299 aaPredicted RBP8.74□□□□□ -1.01
SNIP1-204ENST00000638725 C3orf36Q3SXR2 165 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
SNIP1-204ENST00000638725 FMC1Q96HJ9 113 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 ZNF835Q9Y2P0 537 aa8.74□□□□□ -1.01
SNIP1-204ENST00000638725 TOX4O94842 621 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 CRYGCP07315 174 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 VMA21Q3ZAQ7 101 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 FAM162BQ5T6X4 162 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 TMEM186Q96B77 213 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
SNIP1-204ENST00000638725 ST20Q9HBF5 79 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 ZNF492Q9P255 531 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 IGHV2-70DA0A0C4DH43 119 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 H0Y8G0 127 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 CHEK1O14757 476 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 ENSAO43768 121 aaKnown RBP8.73□□□□□ -1.01
SNIP1-204ENST00000638725 ANKRD39Q53RE8 183 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 CT83Q5H943 113 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 LYPD2Q6UXB3 125 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 RBPMS2Q6ZRY4 209 aaKnown RBP8.73□□□□□ -1.01
SNIP1-204ENST00000638725 CIARTQ8N365 385 aaPredicted RBP8.73□□□□□ -1.01
SNIP1-204ENST00000638725 C1RLQ9NZP8 487 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 SOX21Q9Y651 276 aaPredicted RBP8.73□□□□□ -1.01
SNIP1-204ENST00000638725 LOC102724200A0A096LPH7 203 aaPredicted RBP8.73□□□□□ -1.01
SNIP1-204ENST00000638725 TNFRSF1AP19438 455 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 TRGV9Q99603 122 aa8.73□□□□□ -1.01
SNIP1-204ENST00000638725 TIMM8BQ9Y5J9 83 aaPredicted RBP8.73□□□□□ -1.01
SNIP1-204ENST00000638725 NUDT3O95989 172 aa8.72□□□□□ -1.01
SNIP1-204ENST00000638725 PRB4P10163 310 aaPredicted RBP8.72□□□□□ -1.01
SNIP1-204ENST00000638725 COL8A1P27658 744 aa8.72□□□□□ -1.01
SNIP1-204ENST00000638725 VAMP3Q15836 100 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms