RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-225	ENST00000633295	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	DERL1	Q9BUN8	251 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	SSC5D	A1L4H1	1573 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	LAMB4	A4D0S4	1761 aa		4.6	□□□□□ -1.67
LINC01002-225	ENST00000633295	TRAV38-1	A0A0B4J264	116 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295		J3QRK9	145 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	ORC5	O43913	435 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	LAMB1	P07942	1786 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	ATP5G3	P48201	142 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	C2orf91	Q6ZV80	131 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	PBDC1	Q9BVG4	233 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	HIGD2A	Q9BW72	106 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	TTTY13	Q9BZ97	58 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	PBOV1	Q9GZY1	135 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	MED29	Q9NX70	200 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	TP73-AS1	Q9UF72	201 aa		4.59	□□□□□ -1.67
LINC01002-225	ENST00000633295	UNC80	Q8N2C7	3258 aa		4.59	□□□□□ -1.68
LINC01002-225	ENST00000633295	PSME4	Q14997	1843 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	DDX60	Q8IY21	1712 aa	Known RBP	4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	TSTD3	H0UI37	97 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	TXNDC9	O14530	226 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	RPS4Y1	P22090	263 aa	Known RBP	4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	KRTAP10-9	P60411	292 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	SCGB2B2	Q4G0G5	96 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	MALSU1	Q96EH3	234 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	CAPZA3	Q96KX2	299 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	LINC00167	Q96N53	147 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	IMUP	Q9GZP8	106 aa		4.58	□□□□□ -1.68
LINC01002-225	ENST00000633295	MED23	Q9ULK4	1368 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	MUC3A	Q02505	3323 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	DLG5	Q8TDM6	1919 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295		A0A1W2PQD3	144 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	MAP1LC3B2	A6NCE7	125 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	PFDN1	O60925	122 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	ALDH3A1	P30838	453 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	LYSMD1	Q96S90	227 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	SERPINI1	Q99574	410 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	MAP1LC3B	Q9GZQ8	125 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	CYTL1	Q9NRR1	136 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	MARCO	Q9UEW3	520 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	FAM215A	Q9Y5M1	114 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	ARID1A	O14497	2285 aa		4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	PRRC2A	P48634	2157 aa	Known RBP	4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	LAMA2	P24043	3122 aa	Known RBP	4.57	□□□□□ -1.68
LINC01002-225	ENST00000633295	DOCK5	Q9H7D0	1870 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	NOTCH3	Q9UM47	2321 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	IRGM	A1A4Y4	181 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	FABP5P3	A8MUU1	101 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	UCHL1	P09936	223 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	CCL5	P13501	91 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	GZMH	P20718	246 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	RAB4B	P61018	213 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	DCUN1D2	Q6PH85	259 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	C12orf29	Q8N999	325 aa		4.56	□□□□□ -1.68
LINC01002-225	ENST00000633295	VPS37C	A5D8V6	355 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	TFPT	P0C1Z6	253 aa		4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	ZNF14	P17017	642 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	CASP1	P29466	404 aa		4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	CA5A	P35218	305 aa		4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	ZNF80	P51504	273 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	PIGP	P57054	158 aa		4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	KRTAP13-2	Q52LG2	175 aa		4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	LYRM7	Q5U5X0	104 aa		4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	OR10D4P	Q8NGN7	298 aa		4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	PRUNE2	Q8WUY3	3088 aa		4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295	COL1A1	P02452	1464 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01002-225	ENST00000633295		A0A0J9YW62	118 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	MDFIC2	A0A1B0GVS7	189 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	FUOM	A2VDF0	154 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	CLDN25	C9JDP6	229 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	OR2J2	O76002	312 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	IFNA14	P01570	189 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	HLA-DMB	P28068	263 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	DEFA3	P59666	94 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	RHEB	Q15382	184 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	SPANXN3	Q5MJ09	141 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	FAM24B	Q8N5W8	94 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	PLEKHB2	Q96CS7	222 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	ZNF638	Q14966	1978 aa	Known RBP	4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	NCOR1	O75376	2440 aa		4.54	□□□□□ -1.68
LINC01002-225	ENST00000633295	TRAV41	A0A0B4J266	112 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	C19orf84	I3L1E1	186 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	IGKV3-11	P04433	115 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	HRES1	P13985	223 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	GLRX	P35754	106 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	MEF2B	Q02080	365 aa	Predicted RBP	4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	IGFBP7	Q16270	282 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	TOMM20L	Q6UXN7	152 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	LCA10	Q71F78	164 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	TM2D3	Q9BRN9	247 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	OR8D2	Q9GZM6	311 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	RALGAPA2	Q2PPJ7	1873 aa		4.53	□□□□□ -1.68
LINC01002-225	ENST00000633295	GGT3P	A6NGU5	568 aa		4.52	□□□□□ -1.69
LINC01002-225	ENST00000633295	RIIAD1	A6NNX1	92 aa		4.52	□□□□□ -1.69
LINC01002-225	ENST00000633295	IGHV3-7	P01780	117 aa		4.52	□□□□□ -1.69
LINC01002-225	ENST00000633295	ZNF728	P0DKX0	622 aa		4.52	□□□□□ -1.69
LINC01002-225	ENST00000633295	NUP35	Q8NFH5	326 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms