RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 DEFB114Q30KQ6 69 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 OR8G2PQ6IF36 304 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 ETFRF1Q6IPR1 90 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 TMEM14EPQ6UXP3 125 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 GSG1LQ6UXU4 331 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 ZNF600Q6ZNG1 722 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 TMEM61Q8N0U2 210 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 SLC35E1Q96K37 410 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 SMIM8Q96KF7 97 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 RAB40CQ96S21 281 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 C11orf1Q9H5F2 150 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 PSENENQ9NZ42 101 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 UFC1Q9Y3C8 167 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 STRAPQ9Y3F4 350 aaKnown RBP4.18□□□□□ -1.74
LINC00550-202ENST00000629570 ALG5Q9Y673 324 aa4.18□□□□□ -1.74
LINC00550-202ENST00000629570 TRAV30A0A087WSZ9 112 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 IGHV3-66A0A0C4DH42 116 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 IGHV7-4-1A0A0J9YVY3 117 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 ZFP92A6NM28 416 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 PMS2P5A8MQ11 134 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 K7EMT4 169 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 RGS13O14921 159 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 TSC22D2O75157 780 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 SCGB2A1O75556 95 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 APOHP02749 345 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 IL4P05112 153 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 GPX4P36969 197 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 CAV2P51636 162 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 ELLP55199 621 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 TAS2R30P59541 319 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 YPEL3P61236 119 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 RRAS2P62070 204 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 RPP30P78346 268 aaKnown RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 ZNF90Q03938 601 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 ARL16Q0P5N6 197 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 USF2Q15853 346 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 GUCA2BQ16661 112 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 RGS21Q2M5E4 152 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 LRRC37A5PQ49AS3 106 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 LCN12Q6JVE5 192 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 LILRB2Q8N423 598 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 OR1S2Q8NGQ3 325 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 ST8SIA2Q92186 375 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 MARC2Q969Z3 335 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 RNF2Q99496 336 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 RHPN1-AS1Q9BWJ2 59 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 TECRQ9NZ01 308 aaKnown RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 MRPL27Q9P0M9 148 aaKnown RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 MGAT4CQ9UBM8 478 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 ZMAT5Q9UDW3 170 aaKnown RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 SMPXQ9UHP9 88 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 LSM4Q9Y4Z0 139 aaKnown RBP4.17□□□□□ -1.74
LINC00550-202ENST00000629570 STAB2Q8WWQ8 2551 aa4.17□□□□□ -1.74
LINC00550-202ENST00000629570 TRAV14DV4A0A0A6YYC5 116 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 IGSF23A1L1A6 192 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 SMCO3A2RU48 225 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 FAM24AA6NFZ4 105 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 ZNF785A8K8V0 405 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 H0YIZ8 118 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 L7N2F9 121 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 CHEK1O14757 476 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 DEDDO75618 318 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 CST7O76096 145 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 TOMM40O96008 361 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 CD7P09564 240 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 RD3LP0DJH9 198 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 PSG1P11464 419 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 CXCL3P19876 107 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 BCAP31P51572 246 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 VAMP2P63027 116 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 AKR1C1Q04828 323 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 OR2F1Q13607 317 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 OXA1LQ15070 435 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 DEFB121Q5J5C9 76 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 Q8N1Y9 231 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 TMEM217Q8N7C4 229 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 THAP8Q8NA92 274 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 OR2K2Q8NGT1 345 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 PPP1R1CQ8WVI7 109 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 METTL26Q96S19 204 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 TRGV9Q99603 122 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 GINS3Q9BRX5 216 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 NMES1Q9C002 83 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 WFDC10AQ9H1F0 79 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 TMPRSS5Q9H3S3 457 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 LYRM2Q9NU23 88 aaPredicted RBP4.16□□□□□ -1.74
LINC00550-202ENST00000629570 OR5AC2Q9NZP5 309 aa4.16□□□□□ -1.74
LINC00550-202ENST00000629570 TENM3Q9P273 2699 aa4.15□□□□□ -1.74
LINC00550-202ENST00000629570 IGKV3-7A0A075B6H7 116 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 TSPAN4O14817 238 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 DFFBO76075 338 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 IGHV4-30-4P0DP06 118 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 PVALBP20472 110 aaPredicted RBP4.15□□□□□ -1.75
LINC00550-202ENST00000629570 GATA2P23769 480 aaPredicted RBP4.15□□□□□ -1.75
LINC00550-202ENST00000629570 CRYBB3P26998 211 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 TFPI2P48307 235 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 CD81P60033 236 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 LYZP61626 148 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 DLK1P80370 383 aa4.15□□□□□ -1.75
LINC00550-202ENST00000629570 SLC38A11Q08AI6 406 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms