RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 PFDN5Q99471 154 aa19.34■□□□□ 0.69
CAPNS1-215ENST00000628018 INAFM1C9JVW0 142 aa19.33■□□□□ 0.68
CAPNS1-215ENST00000628018 RNASE1P07998 156 aaKnown RBP19.33■□□□□ 0.68
CAPNS1-215ENST00000628018 HILS1P60008 231 aa19.33■□□□□ 0.68
CAPNS1-215ENST00000628018 SPATA31B1PQ5VZV4 182 aa19.33■□□□□ 0.68
CAPNS1-215ENST00000628018 ZNF329Q86UD4 541 aa19.33■□□□□ 0.68
CAPNS1-215ENST00000628018 GAR1Q9NY12 217 aaKnown RBP19.33■□□□□ 0.68
CAPNS1-215ENST00000628018 FUT9Q9Y231 359 aa19.33■□□□□ 0.68
CAPNS1-215ENST00000628018 HIVEP1P15822 2718 aa19.33■□□□□ 0.68
CAPNS1-215ENST00000628018 COX7A2P2O60397 106 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 SCGB2A1O75556 95 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 STAG3L2P0CL84 134 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 STAG3L3P0CL85 134 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 PSMB8P28062 276 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 RAB9AP51151 201 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 FAM210AQ96ND0 272 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 RNF2Q99496 336 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 SERTAD4Q9NUC0 356 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 DOK5Q9P104 306 aa19.32■□□□□ 0.68
CAPNS1-215ENST00000628018 ELOA3CA0A087WX78 387 aaPredicted RBP19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 CLEC3BP05452 202 aa19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 GPR183P32249 361 aa19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 ADMP35318 185 aa19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 RPL15P61313 204 aaKnown RBP19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 OR51G1Q8NGK1 321 aa19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 CHRDL1Q9BU40 450 aa19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 SCRT1Q9BWW7 348 aa19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 MRPL32Q9BYC8 188 aaKnown RBP19.31■□□□□ 0.68
CAPNS1-215ENST00000628018 ORM2P19652 201 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 SLC35B1P78383 322 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 C10orf113Q5VZT2 155 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 CLEC19AQ6UXS0 136 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 Q6ZSV7 163 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 MIR17HGQ75NE6 70 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 NUPL2O15504 423 aaKnown RBP19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 SRSF3P84103 164 aaKnown RBP19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 UQCC3Q6UW78 93 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 C10orf99Q6UWK7 81 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 ZNF491Q8N8L2 437 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 OR1B1Q8NGR6 318 aa19.3■□□□□ 0.68
CAPNS1-215ENST00000628018 A0A0G2JLM5 398 aa19.29■□□□□ 0.68
CAPNS1-215ENST00000628018 WI2-2373I1.2A0A1W2PRP0 233 aa19.29■□□□□ 0.68
CAPNS1-215ENST00000628018 HYPMO75409 117 aa19.29■□□□□ 0.68
CAPNS1-215ENST00000628018 PMS2P11Q13670 270 aa19.29■□□□□ 0.68
CAPNS1-215ENST00000628018 GUK1Q16774 197 aa19.29■□□□□ 0.68
CAPNS1-215ENST00000628018 LCNL1Q6ZST4 164 aa19.29■□□□□ 0.68
CAPNS1-215ENST00000628018 Q8WTZ3 238 aa19.29■□□□□ 0.68
CAPNS1-215ENST00000628018 ZNF414Q96IQ9 312 aa19.29■□□□□ 0.68
CAPNS1-215ENST00000628018 MTORP42345 2549 aa19.28■□□□□ 0.68
CAPNS1-215ENST00000628018 TGOLN2O43493 480 aa19.28■□□□□ 0.68
CAPNS1-215ENST00000628018 OR2C1O95371 312 aa19.28■□□□□ 0.68
CAPNS1-215ENST00000628018 LYZP61626 148 aa19.28■□□□□ 0.68
CAPNS1-215ENST00000628018 TEX38Q6PEX7 206 aa19.28■□□□□ 0.68
CAPNS1-215ENST00000628018 TMPRSS5Q9H3S3 457 aa19.28■□□□□ 0.68
CAPNS1-215ENST00000628018 CXorf1O96002 111 aa19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 CD5P06127 495 aa19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 FOXE3Q13461 319 aa19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 MORN5Q5VZ52 161 aa19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 LINC00305Q7Z4B0 112 aa19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 RNF125Q96EQ8 232 aa19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 UHRF2Q96PU4 802 aa19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 PBDC1Q9BVG4 233 aa19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 TECRQ9NZ01 308 aaKnown RBP19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 MRPL27Q9P0M9 148 aaKnown RBP19.27■□□□□ 0.68
CAPNS1-215ENST00000628018 IL4P05112 153 aa19.26■□□□□ 0.67
CAPNS1-215ENST00000628018 ELANEP08246 267 aa19.26■□□□□ 0.67
CAPNS1-215ENST00000628018 ARL14EPLP0DKL9 152 aa19.26■□□□□ 0.67
CAPNS1-215ENST00000628018 KIAA0141Q14154 515 aaPredicted RBP19.26■□□□□ 0.67
CAPNS1-215ENST00000628018 TOR2AQ5JU69 321 aa19.26■□□□□ 0.67
CAPNS1-215ENST00000628018 JMJD8Q96S16 334 aa19.26■□□□□ 0.67
CAPNS1-215ENST00000628018 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 RBFOX3A6NFN3 312 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 C8orf88P0DMB2 117 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 TAS2R45P59539 299 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 ZNF343Q6P1L6 599 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 ZNF600Q6ZNG1 722 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 RNF152Q8N8N0 203 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 TMEM231Q9H6L2 316 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 GNG13Q9P2W3 67 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 HIGD1AQ9Y241 93 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 CRYBA1P05813 215 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 S100A1P23297 94 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 PSMB3P49720 205 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 FAM167A-AS1Q96KT0 104 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 RARRES2Q99969 163 aa19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 EIF5A2Q9GZV4 153 aaKnown RBP19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 PUS1Q9Y606 427 aaKnown RBP eCLIP19.25■□□□□ 0.67
CAPNS1-215ENST00000628018 TRAV5A0A0B4J249 113 aa19.24■□□□□ 0.67
CAPNS1-215ENST00000628018 I3L521 148 aa19.24■□□□□ 0.67
CAPNS1-215ENST00000628018 IGHV3-11P01762 117 aa19.24■□□□□ 0.67
CAPNS1-215ENST00000628018 HAGHQ16775 308 aa19.24■□□□□ 0.67
CAPNS1-215ENST00000628018 KHDC3LQ587J8 217 aa19.24■□□□□ 0.67
CAPNS1-215ENST00000628018 MYOZ3Q8TDC0 251 aa19.24■□□□□ 0.67
CAPNS1-215ENST00000628018 ZNF503Q96F45 646 aa19.24■□□□□ 0.67
CAPNS1-215ENST00000628018 SLC25A2Q9BXI2 301 aa19.24■□□□□ 0.67
CAPNS1-215ENST00000628018 CUBNO60494 3623 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 PPP5D1E7EU14 171 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 CRLF1O75462 422 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 PEA15Q15121 130 aa19.23■□□□□ 0.67
CAPNS1-215ENST00000628018 USF2Q15853 346 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms