RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 DPM2O94777 84 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 CD28P10747 220 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 SUPT4H1P63272 117 aaKnown RBP10.53□□□□□ -0.72
SCN8A-209ENST00000627620 MINOS1Q5TGZ0 78 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 MINOS1-NBL1R4GNA1 71 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 C20orf204Q6ZNR8 217 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
SCN8A-209ENST00000627620 ARHGEF17Q96PE2 2063 aaPredicted RBP10.53□□□□□ -0.72
SCN8A-209ENST00000627620 CACNA1DQ01668 2161 aa10.52□□□□□ -0.72
SCN8A-209ENST00000627620 TRAV3A0A0B4J244 114 aa10.52□□□□□ -0.72
SCN8A-209ENST00000627620 A0A1B0GWJ7 208 aa10.52□□□□□ -0.72
SCN8A-209ENST00000627620 LILRA1O75019 489 aa10.52□□□□□ -0.72
SCN8A-209ENST00000627620 BRD3OSQ6XYD6 125 aa10.52□□□□□ -0.72
SCN8A-209ENST00000627620 SLC25A48Q6ZT89 311 aaKnown RBP10.52□□□□□ -0.72
SCN8A-209ENST00000627620 SCRT1Q9BWW7 348 aa10.52□□□□□ -0.72
SCN8A-209ENST00000627620 SAP30O75446 220 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 SLC25A39Q9BZJ4 359 aaPredicted RBP10.52□□□□□ -0.73
SCN8A-209ENST00000627620 A0A0G2JMZ2 1700 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 LRRC37A2A6NM11 1700 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 B4DSR2 109 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 SRSF6Q13247 344 aaKnown RBP10.52□□□□□ -0.73
SCN8A-209ENST00000627620 NIT1Q86X76 327 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 EXOC3-AS1Q8N2X6 119 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 RNF5Q99942 180 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 OOSP1A8MZH6 123 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.73
SCN8A-209ENST00000627620 KIF26BQ2KJY2 2108 aa10.52□□□□□ -0.73
SCN8A-209ENST00000627620 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 GZMBP10144 247 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 RNF182Q8N6D2 247 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 GAFA1Q96PS6 74 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 CHCHD5Q9BSY4 110 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 H3BUX3 64 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 MBD3L4A6NDZ8 208 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-209ENST00000627620 MBD3L3A6NE82 208 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-209ENST00000627620 MBD3L5A6NJ08 208 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-209ENST00000627620 CRPP02741 224 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 BEND2Q8NDZ0 799 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 MBD3L2Q8NHZ7 208 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-209ENST00000627620 H0YJW9 148 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 H3BUT2 72 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BKO60814 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BJP06899 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BOP23527 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BBP33778 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BDP58876 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BCP62807 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST2H2BEQ16778 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 KLF17Q5JT82 389 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-209ENST00000627620 C5orf24Q7Z6I8 188 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BHQ93079 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 MGST2Q99735 147 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BNQ99877 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 HIST1H2BMQ99879 126 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 LAMTOR2Q9Y2Q5 125 aa10.51□□□□□ -0.73
SCN8A-209ENST00000627620 NHP2Q9NX24 153 aaKnown RBP10.51□□□□□ -0.73
SCN8A-209ENST00000627620 B3GALT5-AS1P59052 145 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 LINC00469Q8N7U9 141 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 BMPERQ8N8U9 685 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 NMSQ5H8A3 153 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 SFTA2Q6UW10 78 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 ATP5L2Q7Z4Y8 100 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 TRAV9-2A0A087WT02 112 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 RNF144BQ7Z419 303 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 ADARB2-AS1A8MUL3 147 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 C5orf64Q2M2E5 130 aa10.5□□□□□ -0.73
SCN8A-209ENST00000627620 CHCHD1Q96BP2 118 aaKnown RBP10.5□□□□□ -0.73
SCN8A-209ENST00000627620 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 SLC25A20O43772 301 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 HGFACQ04756 655 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 SPSB3Q6PJ21 355 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 TRGV9Q99603 122 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 M0R1W7 72 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 IGKCP01834 107 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 ZNF415Q09FC8 603 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 Q6P435 159 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 CYTL1Q9NRR1 136 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 DTX2Q86UW9 622 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 TRAV12-3A0A0B4J271 114 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 LINC00473A8K010 186 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 SCN5AQ14524 2016 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 IGHV4-39P01824 125 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 CD5P06127 495 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 ERVK11-1P61568 191 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 NDPQ00604 133 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 FOXL1Q12952 345 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 CYB5R2Q6BCY4 276 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 UNQ6494/PRO21346Q6UXR6 183 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 AGMATQ9BSE5 352 aa10.49□□□□□ -0.73
SCN8A-209ENST00000627620 IGKV1D-17A0A075B6S4 117 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 CMC4P56277 68 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-209ENST00000627620 TMEM14EPQ6UXP3 125 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 IFI27L1Q96BM0 104 aa10.48□□□□□ -0.73
SCN8A-209ENST00000627620 ZNF815PA8K554 130 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms