RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TEX38Q6PEX7 206 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 ZNF329Q86UD4 541 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 NECAP1Q8NC96 275 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 BTF3L4Q96K17 158 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 SRD5A3Q9H8P0 318 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 AURKAIP1Q9NWT8 199 aaPredicted RBP17.37■□□□□ 0.37
PNKP-220ENST00000627232 MRPL27Q9P0M9 148 aaKnown RBP17.37■□□□□ 0.37
PNKP-220ENST00000627232 KLK9Q9UKQ9 250 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 GP9P14770 177 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 MYCNOSP40205 109 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 TAS2R60P59551 318 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 SNRPEP62304 92 aaKnown RBP17.37■□□□□ 0.37
PNKP-220ENST00000627232 OR10G8Q8NGN5 311 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 SGMS2Q8NHU3 365 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 TMEM14CQ9P0S9 112 aa17.37■□□□□ 0.37
PNKP-220ENST00000627232 USP24Q9UPU5 2620 aa17.36■□□□□ 0.37
PNKP-220ENST00000627232 SRSF1Q07955 248 aaKnown RBP eCLIP17.36■□□□□ 0.37
PNKP-220ENST00000627232 CENPWQ5EE01 88 aa17.36■□□□□ 0.37
PNKP-220ENST00000627232 FAM110DQ8TAY7 271 aaPredicted RBP17.36■□□□□ 0.37
PNKP-220ENST00000627232 TMEM68Q96MH6 324 aa17.36■□□□□ 0.37
PNKP-220ENST00000627232 SLC25A39Q9BZJ4 359 aaPredicted RBP17.36■□□□□ 0.37
PNKP-220ENST00000627232 CFAP46Q8IYW2 2715 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 K7EN84 100 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 AP4M1O00189 453 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 UBE2CO00762 179 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 GNG7O60262 68 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 NBEAP1P0C6P0 100 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 SLC25A16P16260 332 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 FOXL1Q12952 345 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 MEGF9Q9H1U4 602 aa17.35■□□□□ 0.37
PNKP-220ENST00000627232 ABCA2Q9BZC7 2435 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 WI2-2373I1.2A0A1W2PRP0 233 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 TRGC2P03986 189 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 MSMBP08118 114 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 TMEM190Q8WZ59 177 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 IGF2BP2-AS1Q96M15 143 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 TXN2Q99757 166 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 HSPB9Q9BQS6 159 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 C21orf62Q9NYP8 219 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 CDC42EP3Q9UKI2 254 aa17.34■□□□□ 0.37
PNKP-220ENST00000627232 SCGB2A1O75556 95 aa17.33■□□□□ 0.37
PNKP-220ENST00000627232 TYMSP04818 313 aa17.33■□□□□ 0.37
PNKP-220ENST00000627232 FCGR2BP31994 310 aaPredicted RBP17.33■□□□□ 0.37
PNKP-220ENST00000627232 CNN1P51911 297 aaKnown RBP17.33■□□□□ 0.37
PNKP-220ENST00000627232 S100A7AQ86SG5 101 aa17.33■□□□□ 0.37
PNKP-220ENST00000627232 AKAP6Q13023 2319 aa17.33■□□□□ 0.36
PNKP-220ENST00000627232 TRAV40A0A0B4J280 105 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 A0A1W2PPQ1 181 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 PPP5D1E7EU14 171 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 PEX7O00628 323 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 NDUFB8O95169 186 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 HNF1AP20823 631 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 C5orf56Q8N8D9 126 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 ZNF491Q8N8L2 437 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 VN1R17PQ8TDU5 208 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 SHANK2-AS3Q9BTD1 123 aa17.32■□□□□ 0.36
PNKP-220ENST00000627232 B4DSR2 109 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 F8W735 103 aaPredicted RBP17.31■□□□□ 0.36
PNKP-220ENST00000627232 H3BRN7 92 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 UNQ5815/PRO19632Q6UWF5 114 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 RNF125Q96EQ8 232 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 RNF24Q9Y225 148 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 MOB4Q9Y3A3 225 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 MED13LQ71F56 2210 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 TRAV9-1A0A075B6T8 112 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 PHOX2AO14813 284 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 ATP6V0E1O15342 81 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 GCGP01275 180 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H1EP10412 219 aaKnown RBP17.31■□□□□ 0.36
PNKP-220ENST00000627232 GATA3P23771 443 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 FAM3BP58499 235 aaPredicted RBP17.31■□□□□ 0.36
PNKP-220ENST00000627232 RANP62826 216 aaKnown RBP17.31■□□□□ 0.36
PNKP-220ENST00000627232 Q56UQ5 140 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 ZNF600Q6ZNG1 722 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 BLNKQ8WV28 456 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 EPDR1Q9UM22 224 aa17.31■□□□□ 0.36
PNKP-220ENST00000627232 TRAV20A0A0B4J274 112 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BKO60814 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 OR2J3O76001 311 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 IGLV2-8P01709 118 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BJP06899 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BOP23527 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BBP33778 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BDP58876 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BCP62807 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 FABP9Q0Z7S8 132 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST2H2BEQ16778 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 CLEC12BQ2HXU8 276 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BHQ93079 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BNQ99877 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 HIST1H2BMQ99879 126 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 C7orf69Q9H7B7 122 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 OSTCQ9NRP0 149 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 IL36BQ9NZH7 164 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 FBXL7Q9UJT9 491 aa17.3■□□□□ 0.36
PNKP-220ENST00000627232 IGHV3OR16-10A0A075B7F0 116 aa17.29■□□□□ 0.36
PNKP-220ENST00000627232 SLC25A5P05141 298 aaKnown RBP17.29■□□□□ 0.36
PNKP-220ENST00000627232 AKR1D1P51857 326 aa17.29■□□□□ 0.36
PNKP-220ENST00000627232 PIFOQ8TCI5 191 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms