RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	CLPS	P04118	112 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	IGLV3-21	P80748	117 aa	Predicted RBP	11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	SPTBN1	Q01082	2364 aa	Known RBP	11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	ALPK2	Q86TB3	2170 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	TMEM238	C9JI98	176 aa		11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	MARF1	Q9Y4F3	1742 aa	Known RBP	11.5	□□□□□ -0.57
NRXN1-222	ENST00000625672	IGKV1D-43	A0A0B4J1Z2	117 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF497	Q6ZNH5	498 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	C5orf30	Q96GV9	206 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	LEPROT	O15243	131 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	KLF12	Q9Y4X4	402 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	PPBP	P02775	128 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	DAD1	P61803	113 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	SPSB3	Q6PJ21	355 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	ATP5L2	Q7Z4Y8	100 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	OR10W1	Q8NGF6	305 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	PSME4	Q14997	1843 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	LINC01590	Q5TEZ4	76 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZMAT4	Q9H898	229 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	LY75	O60449	1722 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	MPDZ	O75970	2070 aa		11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	LSM4	Q9Y4Z0	139 aa	Known RBP	11.49	□□□□□ -0.57
NRXN1-222	ENST00000625672	RNF223	E7ERA6	249 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	KIAA2026	Q5HYC2	2103 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	TRAV13-1	A0A0B4J241	112 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	UCP1	P25874	307 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	FOXF2	Q12947	444 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	NKAPP1	Q8N9T2	125 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	PSPN	O60542	156 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	RBMY1F	Q15415	496 aa	Known RBP	11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	GAGE2E	Q4V326	116 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	GAGE2D	Q9UEU5	116 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	GTF3C1	Q12789	2109 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	PSG1	P11464	419 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	TNFRSF14	Q92956	283 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	CFHR3	Q02985	330 aa		11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	SP5	Q6BEB4	398 aa	Predicted RBP	11.48	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF114	Q8NC26	417 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	SDK2	Q58EX2	2172 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	CD55	P08174	381 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	FOXL1	Q12952	345 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	NR2C2AP	Q86WQ0	139 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	GTF3A	Q92664	365 aa	Known RBP	11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	ANAPC13	Q9BS18	74 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	ZNF236	Q9UL36	1845 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	TPTE2P1	Q5T6R2	138 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	TMEM200B	Q69YZ2	307 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	SNHG12	Q9BXW3	62 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	PMS2P5	A8MQ11	134 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	MINOS1	Q5TGZ0	78 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672	MINOS1-NBL1	R4GNA1	71 aa		11.47	□□□□□ -0.57
NRXN1-222	ENST00000625672		A8MWV9	139 aa		11.46	□□□□□ -0.57
NRXN1-222	ENST00000625672	TNFSF13	O75888	250 aa		11.46	□□□□□ -0.57
NRXN1-222	ENST00000625672	DMRTA1	Q5VZB9	504 aa		11.46	□□□□□ -0.57
NRXN1-222	ENST00000625672	TRAV9-1	A0A075B6T8	112 aa		11.46	□□□□□ -0.57
NRXN1-222	ENST00000625672	MEGF9	Q9H1U4	602 aa		11.46	□□□□□ -0.57
NRXN1-222	ENST00000625672	ANXA2R	Q3ZCQ2	193 aa		11.46	□□□□□ -0.57
NRXN1-222	ENST00000625672	ADM	P35318	185 aa		11.46	□□□□□ -0.58
NRXN1-222	ENST00000625672	MRAP	Q8TCY5	172 aa		11.46	□□□□□ -0.58
NRXN1-222	ENST00000625672	SLC25A16	P16260	332 aa		11.46	□□□□□ -0.58
NRXN1-222	ENST00000625672		Q5PR19	223 aa		11.46	□□□□□ -0.58
NRXN1-222	ENST00000625672	WBP1	Q96G27	269 aa		11.46	□□□□□ -0.58
NRXN1-222	ENST00000625672	DOCK6	Q96HP0	2047 aa		11.46	□□□□□ -0.58
NRXN1-222	ENST00000625672	TRAV9-2	A0A087WT02	112 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	CCL20	P78556	96 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	MAPK1IP1L	Q8NDC0	245 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672		Q96MF0	132 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	DEPP	Q9NTK1	212 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	FREM3	P0C091	2139 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	IGHV1-3	A0A0C4DH29	117 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	SEC11A	P67812	179 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	LCN12	Q6JVE5	192 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	ZNF525	Q8N782	197 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	USMG5	Q96IX5	58 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	COL6A6	A6NMZ7	2263 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	THAP8	Q8NA92	274 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	PARP14	Q460N5	1801 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	EXOC3-AS1	Q8N2X6	119 aa		11.45	□□□□□ -0.58
NRXN1-222	ENST00000625672	IGHV1-8	P0DP01	117 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	COL18A1	P39060	1754 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	TIMP3	P35625	211 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	DNAJC30	Q96LL9	226 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	TRBV6-7	A0A0A0MS04	114 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	PLEKHB2	Q96CS7	222 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	NCR2	O95944	276 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	MPTX1	A8MV57	137 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	SERF1A	O75920	110 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	SYNJ2BP	P57105	145 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	BMPER	Q8N8U9	685 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	MRPL14	Q6P1L8	145 aa	Known RBP	11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	IFI27L1	Q96BM0	104 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	SCRT1	Q9BWW7	348 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672	PRDM13	Q9H4Q3	707 aa		11.44	□□□□□ -0.58
NRXN1-222	ENST00000625672		A0A0G2JNJ9	132 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	FAM223B	A6NKX1	122 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	C22orf46	C9J442	243 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	FAM223A	Q8IWN6	122 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672		Q9UFV3	132 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 570.3 ms