RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 LINC00479Q96M42 142 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 CBLN4Q9NTU7 201 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 MALRD1Q5VYJ5 2156 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 SPG11Q96JI7 2443 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 A0A1B0GUS0 222 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 SMIM27A0A1W2PRY6 76 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 GRIFINA4D1Z8 144 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 LY6HO94772 140 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 MT-ND6P03923 174 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 CRISP2P16562 243 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 PLP1P60201 277 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 COX19Q49B96 90 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 WDR73Q6P4I2 378 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 SRSF8Q9BRL6 282 aaKnown RBP6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 SERTAD4Q9NUC0 356 aa6.64□□□□□ -1.35
SND1-IT1-201ENST00000623342 ZNF705GA8MUZ8 300 aaPredicted RBP6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 TIMM23O14925 209 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 NUPR1O60356 82 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 FRMD6-AS1P0C7T7 363 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 HTR1DP28221 377 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 RANP62826 216 aaKnown RBP6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 DEFA6Q01524 100 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 BAGE2Q86Y30 109 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 OR11H6Q8NGC7 330 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 CMTM2Q8TAZ6 248 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 NEU4Q8WWR8 484 aaPredicted RBP6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 PRO1933Q9H354 126 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 DPM3Q9P2X0 92 aa6.63□□□□□ -1.35
SND1-IT1-201ENST00000623342 TRAV34A0A0B4J273 112 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 GATCO43716 136 aaKnown RBP6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 SPINK4O60575 86 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 NBEAP1P0C6P0 100 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 TCL1AP56279 114 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 ARF6P62330 175 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 LDLRAD2Q5SZI1 272 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 C11orf71Q6IPW1 123 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 FAM231DQ6ZW35 169 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 BLNKQ8WV28 456 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 TP53TG3Q9ULZ0 132 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 EPDR1Q9UM22 224 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 PLXNB1O43157 2135 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 I3L2K1 104 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 M0R1W7 72 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 CNIH1O95406 144 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 SLC25A5P05141 298 aaKnown RBP6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 SNRPCP09234 159 aaKnown RBP6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 ESDP10768 282 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 DDTP30046 118 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 CEACAM3P40198 252 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 UBE2G1P62253 170 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 GNG5P63218 68 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 Q0VG73 95 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 LY6DQ14210 128 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 MMDQ15546 238 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 IQCJQ1A5X6 159 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 TMEM183BQ1AE95 376 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 TMEM136Q6ZRR5 245 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 SSBP3Q9BWW4 388 aaPredicted RBP6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 WNT10AQ9GZT5 417 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 GSX1Q9H4S2 264 aaPredicted RBP6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 NAT8BQ9UHF3 227 aa6.62□□□□□ -1.35
SND1-IT1-201ENST00000623342 LOC105371242A0A075B767 164 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 IZUMO1RA6ND01 250 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 PGPA6NDG6 321 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 NBR2O15453 112 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 AMY1AP04745 511 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 IGLC1P0CG04 106 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 GP9P14770 177 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 PAX1P15863 534 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 PAFAH1B2P68402 229 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 SLC35B1P78383 322 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 LHFPL4Q7Z7J7 247 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 CFHR4Q92496 578 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 MS4A10Q96PG2 267 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 CHRDL1Q9BU40 450 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 HIGD1AQ9Y241 93 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 ZANQ9Y493 2812 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 SERF1AO75920 110 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 CA1P00915 261 aaPredicted RBP6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 PSG1P11464 419 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 TPPP2P59282 170 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 BAGE3Q86Y29 109 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 ZNF664Q8N3J9 261 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 NUDT10Q8NFP7 164 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 FAM168AQ92567 244 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 MBD6Q96DN6 1003 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 SMIM12Q96EX1 92 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 NUDT11Q96G61 164 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 GRAMD2BQ96HH9 432 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 NOL4LQ96MY1 436 aaPredicted RBP6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 RASL11BQ9BPW5 248 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 KLF12Q9Y4X4 402 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 HILPDAQ9Y5L2 63 aa6.61□□□□□ -1.35
SND1-IT1-201ENST00000623342 LRRK2Q5S007 2527 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 ODF3BA8MYP8 253 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 SCGB1D1O95968 90 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 HLA-DQA1P01909 254 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 PRTN3P24158 256 aa6.6□□□□□ -1.35
SND1-IT1-201ENST00000623342 LINC00310P59036 64 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms