RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 A0A0G2JRQ6 117 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 IGSF23A1L1A6 192 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 ZNF705EA8MWA4 302 aaPredicted RBP3.63□□□□□ -1.83
VPS29-212ENST00000621131 LEUTXA8MZ59 168 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 UMAD1C9J7I0 102 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 LYNX1G3V0Z9 82 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 SLC31A2O15432 143 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 SOX15O60248 233 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 RAMP3O60896 148 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 FOXH1O75593 365 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 IFNA10P01566 189 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 IGKV1-39P01597 117 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 PRH1P02810 166 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 IGKV1D-39P04432 117 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 SEC11BP0C7V7 166 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 LYNX1P0DP58 116 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 USF1P22415 310 aaPredicted RBP3.63□□□□□ -1.83
VPS29-212ENST00000621131 CAMLGP49069 296 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 ATP5IP56385 69 aaPredicted RBP3.63□□□□□ -1.83
VPS29-212ENST00000621131 OR2B8PP59922 312 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 SLC38A11Q08AI6 406 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 TMEM267Q0VDI3 215 aaPredicted RBP3.63□□□□□ -1.83
VPS29-212ENST00000621131 CLINT1Q14677 625 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 HLA-DRB5Q30154 266 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 AKR1C8PQ5T2L2 129 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 RPL7L1Q6DKI1 246 aaKnown RBP3.63□□□□□ -1.83
VPS29-212ENST00000621131 DPPA3Q6W0C5 159 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 IL34Q6ZMJ4 242 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 ZNF833PQ6ZTB9 187 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 SSX9Q7RTT3 188 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 SLC7A5P1Q8MH63 180 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 COMMD1Q8N668 190 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 TMEM252Q8N6L7 170 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 ZNF709Q8N972 641 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 HSD17B11Q8NBQ5 300 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 OR10P1Q8NGE3 313 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 OR4C13Q8NGP0 309 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 OR5C1Q8NGR4 320 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 LHX4Q969G2 390 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 GINS3Q9BRX5 216 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 PARD6GQ9BYG4 376 aaPredicted RBP3.63□□□□□ -1.83
VPS29-212ENST00000621131 COMMD5Q9GZQ3 224 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 NARFLQ9H6Q4 476 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 PLEKHA3Q9HB20 300 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 FOXA2Q9Y261 457 aaPredicted RBP3.63□□□□□ -1.83
VPS29-212ENST00000621131 ZNF257Q9Y2Q1 563 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 INSIG2Q9Y5U4 225 aa3.63□□□□□ -1.83
VPS29-212ENST00000621131 BTBD17A6NE02 478 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 RPL37AP8A6NKH3 93 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 OOSP1A8MZH6 123 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 KRBOX1C9JBD0 128 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 H3BP45 60 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 I3L521 148 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 K7EQG2 157 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 MPDU1O75352 247 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 MMP23AO75900 390 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 CST7O76096 145 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 KBTBD11O94819 623 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 CFDP00746 253 aaPredicted RBP3.62□□□□□ -1.83
VPS29-212ENST00000621131 IGHV2-5P01817 119 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 HBE1P02100 147 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 MBP02144 154 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 ARG1P05089 322 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 NMBP08949 121 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 P0C879 139 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 COX7A1P24310 79 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 HTR1DP28221 377 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 MAS1LP35410 378 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 SNCAP37840 140 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 LGALS7P47929 136 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 SULT1A2P50226 295 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 DYNLT3P51808 116 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 ZNF137PP52743 207 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 SUB1P53999 127 aaKnown RBP eCLIP3.62□□□□□ -1.835e-6■■■■■ 28.3
VPS29-212ENST00000621131 ATP5J2P56134 94 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 DLX6P56179 175 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 HSPE1P61604 102 aaKnown RBP3.62□□□□□ -1.83
VPS29-212ENST00000621131 NDPQ00604 133 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 ZNF616Q08AN1 781 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 RAB31Q13636 194 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 PLGLAQ15195 96 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 POU2AF1Q16633 256 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 FAM74A1Q5RGS3 127 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 OR8G2PQ6IF36 304 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 UQCC3Q6UW78 93 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 HSD17B13Q7Z5P4 300 aaPredicted RBP3.62□□□□□ -1.83
VPS29-212ENST00000621131 MOB3BQ86TA1 216 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 ZNF429Q86V71 674 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 PUSL1Q8N0Z8 303 aaKnown RBP3.62□□□□□ -1.83
VPS29-212ENST00000621131 STPG2Q8N412 459 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 PNKDQ8N490 385 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 LY6G5BQ8NDX9 201 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 LFNGQ8NES3 379 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 OR2G3Q8NGZ4 309 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 OR5B3Q8NH48 314 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 C5orf30Q96GV9 206 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 RNF5Q99942 180 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 ZNF251Q9BRH9 671 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 PBDC1Q9BVG4 233 aa3.62□□□□□ -1.83
VPS29-212ENST00000621131 TMEM147Q9BVK8 224 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms