RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 PAXXQ9BUH6 204 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 ZNF492Q9P255 531 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 SH3BGRL2Q9UJC5 107 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 USP24Q9UPU5 2620 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 HCFC1P51610 2035 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.78□□□□□ -1
UPF3A-212ENST00000619079 H0Y8G0 127 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 CEACAM4O75871 244 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 P01737 135 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 PPIAL4GP0DN37 164 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 CYB561P49447 251 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 PRCDQ00LT1 54 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 SRYQ05066 204 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 RPL39P5Q59GN2 51 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 MDP1Q86V88 176 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 FAM90A1Q86YD7 464 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 TEX45Q8NA69 505 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.78□□□□□ -1
UPF3A-212ENST00000619079 HINT2Q9BX68 163 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 PRSS22Q9GZN4 317 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 AP5S1Q9NUS5 200 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 RABAC1Q9UI14 185 aa8.78□□□□□ -1
UPF3A-212ENST00000619079 CACNA1GO43497 2377 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 J3QR89 54 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 WNT9BO14905 357 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 GNG7O60262 68 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 FGF6P10767 208 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 POU2AF1Q16633 256 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 LTC4SQ16873 150 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 ZADH2Q8N4Q0 377 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 STXBP6Q8NFX7 210 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 OR1L8Q8NGR8 309 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 CACNG8Q8WXS5 425 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 IFI27L2Q9H2X8 130 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 OBP2BQ9NPH6 170 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 B4GALT7Q9UBV7 327 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 KLF12Q9Y4X4 402 aa8.77□□□□□ -1.01
UPF3A-212ENST00000619079 TEX50A0A1B0GTY4 177 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 A1L4Q6 167 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 TMEM189A5PLL7 270 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 F2RL2O00254 374 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 COX7A2P2O60397 106 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 FABP6P51161 128 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 BOD1L2Q8IYS8 172 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 ZNF747Q9BV97 191 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 CXXC4Q9H2H0 198 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 PIEZO2Q9H5I5 2752 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 NBEAQ8NFP9 2946 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 IGHV3-64DA0A0J9YX35 117 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 LY6DQ14210 128 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 SPINK14Q6IE38 97 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 DAZAP1Q96EP5 407 aaKnown RBP8.76□□□□□ -1.01
UPF3A-212ENST00000619079 ZC2HC1AQ96GY0 325 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 RAB9BQ9NP90 201 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 EPDR1Q9UM22 224 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 BSNQ9UPA5 3926 aa8.76□□□□□ -1.01
UPF3A-212ENST00000619079 TET2Q6N021 2002 aaPredicted RBP8.76□□□□□ -1.01
UPF3A-212ENST00000619079 NCKAP5O14513 1909 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 K7EM74 188 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 SMAD7O15105 426 aaKnown RBP8.75□□□□□ -1.01
UPF3A-212ENST00000619079 AZU1P20160 251 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 CD69Q07108 199 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 GUSBP1Q15486 140 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 C10orf113Q5VZT2 155 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 OR9G1Q8NH87 305 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 PPP1R35Q8TAP8 253 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 NEU4Q8WWR8 484 aaPredicted RBP8.75□□□□□ -1.01
UPF3A-212ENST00000619079 FMC1Q96HJ9 113 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 PGLYRP4Q96LB8 373 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 ATP6V0BQ99437 205 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 MLST8Q9BVC4 326 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 TMUB1Q9BVT8 246 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 TRAV5A0A0B4J249 113 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 HAX1O00165 279 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 MYCNOSP40205 109 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 EDDM3AQ14507 147 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 CR1LQ2VPA4 569 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 ASPHD1Q5U4P2 390 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 WDR82Q6UXN9 313 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 ZNF826PQ6ZT77 177 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 PDPNQ86YL7 162 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 OR4A5Q8NH83 315 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 GTSF1Q8WW33 167 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 FREM1Q5H8C1 2179 aa8.75□□□□□ -1.01
UPF3A-212ENST00000619079 SMG1Q96Q15 3661 aaKnown RBP8.75□□□□□ -1.01
UPF3A-212ENST00000619079 ITPR1Q14643 2758 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 CACNA1DQ01668 2161 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 DOCK10Q96BY6 2186 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 C19orf71A6NCJ1 209 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 SRRM4A7MD48 611 aaKnown RBP8.74□□□□□ -1.01
UPF3A-212ENST00000619079 SNAI2O43623 268 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 PYYP10082 97 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 CD46P15529 392 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 RPL24P83731 157 aaKnown RBP8.74□□□□□ -1.01
UPF3A-212ENST00000619079 TMEM177Q53S58 311 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 TIMM23BQ5SRD1 257 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 MOB3BQ86TA1 216 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 C11orf53Q8IXP5 236 aa8.74□□□□□ -1.01
UPF3A-212ENST00000619079 MCRIP2Q9BUT9 160 aaKnown RBP8.74□□□□□ -1.01
UPF3A-212ENST00000619079 PLSCR4Q9NRQ2 329 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms