RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 IGHV3-48P01763 117 aa7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 WT1P19544 449 aaPredicted RBP7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 RCC1LQ96I51 464 aaKnown RBP7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 ADARB2-AS1A8MUL3 147 aa7.9□□□□□ -1.15
TNFRSF9-204ENST00000615230 ORMDL2Q53FV1 153 aa7.9□□□□□ -1.15
TNFRSF9-204ENST00000615230 MRPL18Q9H0U6 180 aaKnown RBP7.9□□□□□ -1.15
TNFRSF9-204ENST00000615230 FAM120AOSQ5T036 256 aa7.9□□□□□ -1.15
TNFRSF9-204ENST00000615230 OR11H6Q8NGC7 330 aa7.9□□□□□ -1.15
TNFRSF9-204ENST00000615230 MPTX1A8MV57 137 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 H3BTX0 84 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 APOMO95445 188 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 ACTL10Q5JWF8 245 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 RHODO00212 210 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 TFF1P04155 84 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 SELLP14151 372 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 CCL20P78556 96 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 CNTFRP26992 372 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 FHITP49789 147 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 DAD1P61803 113 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 SEC11AP67812 179 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 PIKFYVEQ9Y2I7 2098 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 CD5LO43866 347 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 SRIP30626 198 aa7.89□□□□□ -1.15
TNFRSF9-204ENST00000615230 PRR32B1ATL7 298 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 SYNJ2BPP57105 145 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 TTC9CQ8N5M4 171 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 SMIM12Q96EX1 92 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 TBX15Q96SF7 602 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 DKK1O94907 266 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 MYCNOSP40205 109 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 LBHQ53QV2 105 aaPredicted RBP7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 TMEM88Q6PEY1 159 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 ORMDL3Q8N138 153 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 NUDT11Q96G61 164 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 DPH3P1Q9H4G8 78 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 LINC00527Q9UJ94 153 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 PSG1P11464 419 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 RPL15P61313 204 aaKnown RBP7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 VAMP3Q15836 100 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 PSG3Q16557 428 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 ZNF880Q6PDB4 577 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 LHFPL1Q86WI0 220 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 ZNF843Q8N446 348 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 OR2K2Q8NGT1 345 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 LEPROTL1O95214 131 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 LGALS1P09382 135 aaKnown RBP7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 SRSF1Q07955 248 aaKnown RBP eCLIP7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 ATP5L2Q7Z4Y8 100 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 A0A087WX48 190 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 SCGB3A1Q96QR1 104 aa7.88□□□□□ -1.15
TNFRSF9-204ENST00000615230 Q6ZR03 302 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 ST6GALNAC6Q969X2 333 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 IGHV4-39P01824 125 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 RNF224P0DH78 156 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 FOLR2P14207 255 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 HOXA5P20719 270 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 QRFPP83859 136 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 PRB3Q04118 309 aaPredicted RBP7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 OR11H1Q8NG94 326 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 ZNF98A6NK75 572 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 INSL3P51460 131 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 SRSF2Q01130 221 aaKnown RBP7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 DEFB112Q30KQ8 113 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 OSTCQ9NRP0 149 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 OR10W1Q8NGF6 305 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 ATP6V0BQ99437 205 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 FOXC2Q99958 501 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 CHCHD5Q9BSY4 110 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 SHANK2-AS3Q9BTD1 123 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 FANCMQ8IYD8 2048 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 TGIF2-C20orf24A0A0A6YYL0 155 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 LY6HO94772 140 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 NIT2Q9NQR4 276 aa7.87□□□□□ -1.15
TNFRSF9-204ENST00000615230 C17orf58Q2M2W7 97 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 IMMP2LQ96T52 175 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 TRGV1A0A0A0MS02 117 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 H2BFSP57053 126 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 OVOL3O00110 214 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 ZNF329Q86UD4 541 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 TMEM256Q8N2U0 113 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 RNF152Q8N8N0 203 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 TRAV34A0A0B4J273 112 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 K7EM74 188 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 TREML4Q6UXN2 200 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 GLMPQ8WWB7 406 aa7.86□□□□□ -1.15
TNFRSF9-204ENST00000615230 CLPSL1A2RUU4 121 aa7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 VCX2Q9H322 139 aa7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 RNASE2P10153 161 aaKnown RBP7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 SNRPEP62304 92 aaKnown RBP7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 CYSLTR1Q9Y271 337 aa7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 IGHV4-30-2A0A087WSY4 118 aa7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 TMEM50AO95807 157 aa7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 MAPK1IP1LQ8NDC0 245 aa7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 OR10D4PQ8NGN7 298 aa7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 SLC25A20O43772 301 aa7.85□□□□□ -1.15
TNFRSF9-204ENST00000615230 SNRPCP09234 159 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms