RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CELSR2Q9HCU4 2923 aa15.19■□□□□ 0.02
MMP28-204ENST00000615136 SPG11Q96JI7 2443 aa15.19■□□□□ 0.02
MMP28-204ENST00000615136 TRAV5A0A0B4J249 113 aa15.19■□□□□ 0.02
MMP28-204ENST00000615136 C10orf113Q5VZT2 155 aa15.19■□□□□ 0.02
MMP28-204ENST00000615136 PATE2Q6UY27 113 aa15.19■□□□□ 0.02
MMP28-204ENST00000615136 IGF2BP2-AS1Q96M15 143 aa15.19■□□□□ 0.02
MMP28-204ENST00000615136 CCL19Q99731 98 aa15.19■□□□□ 0.02
MMP28-204ENST00000615136 ZNF355PQ9NSJ1 428 aa15.19■□□□□ 0.02
MMP28-204ENST00000615136 NBR2O15453 112 aa15.18■□□□□ 0.02
MMP28-204ENST00000615136 TOX4O94842 621 aa15.18■□□□□ 0.02
MMP28-204ENST00000615136 MOSP00540 346 aa15.18■□□□□ 0.02
MMP28-204ENST00000615136 ERVFC1-1P60608 527 aa15.18■□□□□ 0.02
MMP28-204ENST00000615136 SUMO1P63165 101 aaKnown RBP15.18■□□□□ 0.02
MMP28-204ENST00000615136 OR5I1Q13606 314 aa15.18■□□□□ 0.02
MMP28-204ENST00000615136 HES1Q14469 280 aa15.18■□□□□ 0.02
MMP28-204ENST00000615136 ETFRF1Q6IPR1 90 aa15.18■□□□□ 0.02
MMP28-204ENST00000615136 AJUBAQ96IF1 538 aa15.18■□□□□ 0.02
MMP28-204ENST00000615136 TRAV20A0A0B4J274 112 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 RPEL1Q2QD12 228 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 TIGITQ495A1 244 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 FAM103A1Q9BTL3 118 aaKnown RBP15.17■□□□□ 0.02
MMP28-204ENST00000615136 OSTCQ9NRP0 149 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 ABCA1O95477 2261 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 GCGP01275 180 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 IGLV2-8P01709 118 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 RD3LP0DJH9 198 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 ADMP35318 185 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 GBGT1Q8N5D6 347 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 NPBQ8NG41 125 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 NRGNQ92686 78 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 TMEM18Q96B42 140 aa15.17■□□□□ 0.02
MMP28-204ENST00000615136 MAP1AP78559 2803 aaPredicted RBP15.16■□□□□ 0.02
MMP28-204ENST00000615136 NDUFA3O95167 84 aa15.16■□□□□ 0.02
MMP28-204ENST00000615136 GZMBP10144 247 aa15.16■□□□□ 0.02
MMP28-204ENST00000615136 ZNF843Q8N446 348 aa15.16■□□□□ 0.02
MMP28-204ENST00000615136 GSX1Q9H4S2 264 aaPredicted RBP15.16■□□□□ 0.02
MMP28-204ENST00000615136 F11RQ9Y624 299 aaKnown RBP15.16■□□□□ 0.02
MMP28-204ENST00000615136 SRSF1Q07955 248 aaKnown RBP eCLIP15.16■□□□□ 0.02
MMP28-204ENST00000615136 PAXXQ9BUH6 204 aa15.16■□□□□ 0.02
MMP28-204ENST00000615136 IGHV4-61A0A0C4DH41 118 aa15.15■□□□□ 0.02
MMP28-204ENST00000615136 ISLRO14498 428 aa15.15■□□□□ 0.02
MMP28-204ENST00000615136 CNIH1O95406 144 aa15.15■□□□□ 0.02
MMP28-204ENST00000615136 PYYP10082 97 aa15.15■□□□□ 0.02
MMP28-204ENST00000615136 TRGV9Q99603 122 aa15.15■□□□□ 0.02
MMP28-204ENST00000615136 CDC42EP3Q9UKI2 254 aa15.15■□□□□ 0.02
MMP28-204ENST00000615136 TAS2R60P59551 318 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 C9orf152Q5JTZ5 239 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 FAM120AOSQ5T036 256 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 TMEM116Q8NCL8 245 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 TNFRSF19Q9NS68 423 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 UBR5O95071 2799 aaPredicted RBP15.14■□□□□ 0.01
MMP28-204ENST00000615136 CORTO00230 105 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 CBLN1P23435 193 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 C5orf64Q2M2E5 130 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 MINOS1Q5TGZ0 78 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 Q8N6K4 173 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 FXYD5Q96DB9 178 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 MINOS1-NBL1R4GNA1 71 aa15.14■□□□□ 0.01
MMP28-204ENST00000615136 KMT2BQ9UMN6 2715 aaPredicted RBP15.13■□□□□ 0.01
MMP28-204ENST00000615136 FBN2P35556 2912 aa15.13■□□□□ 0.01
MMP28-204ENST00000615136 TRBV9A0A0B4J1U6 114 aa15.13■□□□□ 0.01
MMP28-204ENST00000615136 PKIAP61925 76 aa15.13■□□□□ 0.01
MMP28-204ENST00000615136 FXYD3Q14802 87 aa15.13■□□□□ 0.01
MMP28-204ENST00000615136 FAM209BQ5JX69 171 aa15.13■□□□□ 0.01
MMP28-204ENST00000615136 C22orf15Q8WYQ4 148 aa15.13■□□□□ 0.01
MMP28-204ENST00000615136 FAM168AQ92567 244 aa15.13■□□□□ 0.01
MMP28-204ENST00000615136 WNT10AQ9GZT5 417 aa15.13■□□□□ 0.01
MMP28-204ENST00000615136 RNASE7Q9H1E1 156 aaKnown RBP15.13■□□□□ 0.01
MMP28-204ENST00000615136 UBE2E1P51965 193 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 NDPQ00604 133 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 LINC00305Q7Z4B0 112 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 ZNF329Q86UD4 541 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 OR1L6Q8NGR2 347 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 C10orf105Q8TEF2 133 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 MRPL18Q9H0U6 180 aaKnown RBP15.12■□□□□ 0.01
MMP28-204ENST00000615136 SAA4P35542 130 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 CCDC144NLQ6NUI1 221 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 OR8I2Q8N0Y5 310 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 PIP4P2Q8N4L2 257 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 STXBP6Q8NFX7 210 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 PERPQ96FX8 193 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 SPOCK3Q9BQ16 436 aa15.12■□□□□ 0.01
MMP28-204ENST00000615136 NCBP2LA6PVI3 153 aaKnown RBP15.11■□□□□ 0.01
MMP28-204ENST00000615136 MYCNOSP40205 109 aa15.11■□□□□ 0.01
MMP28-204ENST00000615136 CX3CL1P78423 397 aa15.11■□□□□ 0.01
MMP28-204ENST00000615136 KLF17Q5JT82 389 aaPredicted RBP15.11■□□□□ 0.01
MMP28-204ENST00000615136 IGHV4-30-2A0A087WSY4 118 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 A0A1B0GUS0 222 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 I3L2K1 104 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 PEX7O00628 323 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 PAX1P15863 534 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 ATP5J2P56134 94 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 EBI3Q14213 229 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 IBA57Q5T440 356 aaKnown RBP15.1■□□□□ 0.01
MMP28-204ENST00000615136 ASPHD1Q5U4P2 390 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 TMEM256Q8N2U0 113 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 GNB1LQ9BYB4 327 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 FAM208BQ5VWN6 2430 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 OOSP1A8MZH6 123 aa15.1■□□□□ 0.01
MMP28-204ENST00000615136 VWC2LB2RUY7 222 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms