RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 KMT2EQ8IZD2 1858 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 ATG2AQ2TAZ0 1938 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 EPG5Q9HCE0 2579 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 IQCF6A8MYZ5 107 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 NBEAP1P0C6P0 100 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 CCL3L1P16619 93 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 CSN1S1P47710 185 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 PSG9Q00887 426 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 SCGB2A2Q13296 93 aa9.64□□□□□ -0.87
CDH5-208ENST00000614547 NKX2-8O15522 239 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 YPEL1O60688 119 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 GOSR1O95249 250 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 PRSS1P07477 247 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 ERVK11-1P61568 191 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 CIARTQ8N365 385 aaPredicted RBP9.63□□□□□ -0.87
CDH5-208ENST00000614547 TEX45Q8NA69 505 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 YPEL2Q96QA6 119 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 ZNF430Q9H8G1 570 aaPredicted RBP9.63□□□□□ -0.87
CDH5-208ENST00000614547 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 GNG7O60262 68 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 ARL3P36405 182 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 SLC25A33Q9BSK2 321 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 MRPL20Q9BYC9 149 aaKnown RBP9.63□□□□□ -0.87
CDH5-208ENST00000614547 SPRR3Q9UBC9 169 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 SYS1-DBNDD2H3BUS1 97 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 COX7A1P24310 79 aa9.63□□□□□ -0.87
CDH5-208ENST00000614547 SSBP2P81877 361 aaPredicted RBP9.63□□□□□ -0.87
CDH5-208ENST00000614547 PEF1Q9UBV8 284 aaKnown RBP9.63□□□□□ -0.87
CDH5-208ENST00000614547 MALRD1Q5VYJ5 2156 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 SAP30O75446 220 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 KRTAP27-1Q3LI81 207 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 PERPQ96FX8 193 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 MRPS16Q9Y3D3 137 aaKnown RBP9.62□□□□□ -0.87
CDH5-208ENST00000614547 PTPN13Q12923 2485 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 IGKV1D-17A0A075B6S4 117 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 IGHV3OR16-8A0A075B7F1 116 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 IGHV3-35A0A0C4DH35 117 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 ADTRPQ96IZ2 230 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 TRAV30A0A087WSZ9 112 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 IGHV2-26A0A0B4J1V2 119 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 DLL1O00548 723 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 PROP1O75360 226 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 OR2J3O76001 311 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 RBX1P62877 108 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 HES1Q14469 280 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 RNFT1Q5M7Z0 435 aa9.62□□□□□ -0.87
CDH5-208ENST00000614547 RPP21Q9H633 154 aaKnown RBP9.62□□□□□ -0.87
CDH5-208ENST00000614547 LIPFP07098 398 aa9.61□□□□□ -0.87
CDH5-208ENST00000614547 DYNLRB1Q9NP97 96 aa9.61□□□□□ -0.87
CDH5-208ENST00000614547 DEFB109BQ30KR1 87 aa9.61□□□□□ -0.87
CDH5-208ENST00000614547 PRSS57Q6UWY2 283 aa9.61□□□□□ -0.87
CDH5-208ENST00000614547 RNF7Q9UBF6 113 aa9.61□□□□□ -0.87
CDH5-208ENST00000614547 IGLC7A0M8Q6 106 aa9.61□□□□□ -0.87
CDH5-208ENST00000614547 CD69Q07108 199 aa9.61□□□□□ -0.87
CDH5-208ENST00000614547 EXOC3-AS1Q8N2X6 119 aa9.61□□□□□ -0.87
CDH5-208ENST00000614547 A6NDN8 102 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 UPK2O00526 184 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 ITGB1BP1O14713 200 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 MMP23AO75900 390 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 VMA21Q3ZAQ7 101 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 MRPL52Q86TS9 123 aaKnown RBP9.6□□□□□ -0.87
CDH5-208ENST00000614547 PNKDQ8N490 385 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 C5orf17Q8NAS9 161 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 SLC25A10Q9UBX3 287 aaPredicted RBP9.6□□□□□ -0.87
CDH5-208ENST00000614547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDH5-208ENST00000614547 K7EQM0 130 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 DLX1P56177 255 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 WDR31Q8NA23 367 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 GPR82Q96P67 336 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 EPDR1Q9UM22 224 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 IGKV1OR2-108A0A075B7D4 117 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 GCSAMQ8N6F7 178 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 ZPBPQ9BS86 351 aa9.6□□□□□ -0.87
CDH5-208ENST00000614547 FAM231BA6NCW3 169 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 CACNG7P62955 275 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 SPRNQ5BIV9 151 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 ZNF71Q9NQZ8 489 aaPredicted RBP9.59□□□□□ -0.87
CDH5-208ENST00000614547 HIF1ANQ9NWT6 349 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 KBTBD11-OT1A0A1B0GTJ5 212 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 SRRM4A7MD48 611 aaKnown RBP9.59□□□□□ -0.87
CDH5-208ENST00000614547 SARAFQ96BY9 339 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 LOC105371242A0A075B767 164 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 IGHV1-24A0A0C4DH33 117 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 C9orf172C9J069 976 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 PRCDQ00LT1 54 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 RIGQ13278 110 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 GUSBP1Q15486 140 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 MTURNQ8N3F0 131 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 C9orf106Q8NAJ2 232 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 C11orf52Q96A22 123 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 Q9H3A6 140 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 ST20Q9HBF5 79 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 SPCS1Q9Y6A9 102 aa9.59□□□□□ -0.87
CDH5-208ENST00000614547 CSPG4Q6UVK1 2322 aa9.58□□□□□ -0.88
CDH5-208ENST00000614547 IGHV2-70DA0A0C4DH43 119 aa9.58□□□□□ -0.88
CDH5-208ENST00000614547 FOXC1Q12948 553 aa9.58□□□□□ -0.88
CDH5-208ENST00000614547 TMEM97Q5BJF2 176 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms