RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 DOK5Q9P104 306 aa13.58□□□□□ -0.24
SREK1-216ENST00000612404 TRBV12-3P01733 135 aa13.57□□□□□ -0.24
SREK1-216ENST00000612404 YPEL3P61236 119 aaPredicted RBP13.57□□□□□ -0.24
SREK1-216ENST00000612404 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
SREK1-216ENST00000612404 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.57□□□□□ -0.24
SREK1-216ENST00000612404 TOMM40O96008 361 aa13.57□□□□□ -0.24
SREK1-216ENST00000612404 ORM2P19652 201 aa13.57□□□□□ -0.24
SREK1-216ENST00000612404 ARL3P36405 182 aa13.57□□□□□ -0.24
SREK1-216ENST00000612404 ATP6V0BQ99437 205 aa13.57□□□□□ -0.24
SREK1-216ENST00000612404 CLPSL1A2RUU4 121 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 LYZP61626 148 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 TCTEX1D4Q5JR98 221 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 FAM122CQ6P4D5 195 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 SPSB3Q6PJ21 355 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 RPP25LQ8N5L8 163 aaKnown RBP13.56□□□□□ -0.24
SREK1-216ENST00000612404 C11orf44Q8N8P7 122 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 OR51G1Q8NGK1 321 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 OR1B1Q8NGR6 318 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 LRRC20Q8TCA0 184 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 MYOZ3Q8TDC0 251 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 Q8WTZ3 238 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 UBE2E2Q96LR5 201 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 PBDC1Q9BVG4 233 aa13.56□□□□□ -0.24
SREK1-216ENST00000612404 COX7A2P2O60397 106 aa13.55□□□□□ -0.24
SREK1-216ENST00000612404 NMBP08949 121 aa13.55□□□□□ -0.24
SREK1-216ENST00000612404 WIPF2Q8TF74 440 aaPredicted RBP13.55□□□□□ -0.24
SREK1-216ENST00000612404 ATRQ13535 2644 aa13.55□□□□□ -0.24
SREK1-216ENST00000612404 IL4P05112 153 aa13.55□□□□□ -0.24
SREK1-216ENST00000612404 OR5G3P0C626 314 aa13.55□□□□□ -0.24
SREK1-216ENST00000612404 HIST2H2BDQ6DRA6 164 aa13.55□□□□□ -0.24
SREK1-216ENST00000612404 DPPA3Q6W0C5 159 aa13.55□□□□□ -0.24
SREK1-216ENST00000612404 SLC25A22Q9H936 323 aa13.55□□□□□ -0.24
SREK1-216ENST00000612404 PEF1Q9UBV8 284 aaKnown RBP13.55□□□□□ -0.24
SREK1-216ENST00000612404 PUS1Q9Y606 427 aaKnown RBP eCLIP13.55□□□□□ -0.24
SREK1-216ENST00000612404 EIF3GO75821 320 aaKnown RBP eCLIP13.54□□□□□ -0.24
SREK1-216ENST00000612404 SAT2Q96F10 170 aaPredicted RBP13.54□□□□□ -0.24
SREK1-216ENST00000612404 RCC1LQ96I51 464 aaKnown RBP13.54□□□□□ -0.24
SREK1-216ENST00000612404 A0A1W2PPV4 95 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 CD28P10747 220 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 BLOC1S1P78537 153 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 RELQ04864 619 aaPredicted RBP13.54□□□□□ -0.24
SREK1-216ENST00000612404 CLLU1Q5K131 121 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 ZNF600Q6ZNG1 722 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 OR1L4Q8NGR5 311 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 TMEM37Q8WXS4 190 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 ACTR3CQ9C0K3 210 aaPredicted RBP13.54□□□□□ -0.24
SREK1-216ENST00000612404 DNAJC4Q9NNZ3 241 aa13.54□□□□□ -0.24
SREK1-216ENST00000612404 A0A1B0GV50 99 aa13.53□□□□□ -0.24
SREK1-216ENST00000612404 HMGB3O15347 200 aaKnown RBP13.53□□□□□ -0.24
SREK1-216ENST00000612404 HYPMO75409 117 aa13.53□□□□□ -0.24
SREK1-216ENST00000612404 LGALS1P09382 135 aaKnown RBP13.53□□□□□ -0.24
SREK1-216ENST00000612404 CDC34P49427 236 aaPredicted RBP13.53□□□□□ -0.24
SREK1-216ENST00000612404 PROK1P58294 105 aa13.53□□□□□ -0.24
SREK1-216ENST00000612404 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
SREK1-216ENST00000612404 FAM78BQ5VT40 261 aa13.53□□□□□ -0.24
SREK1-216ENST00000612404 C10orf113Q5VZT2 155 aa13.53□□□□□ -0.24
SREK1-216ENST00000612404 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.53□□□□□ -0.24
SREK1-216ENST00000612404 RNF125Q96EQ8 232 aa13.53□□□□□ -0.24
SREK1-216ENST00000612404 PFDN5Q99471 154 aa13.53□□□□□ -0.24
SREK1-216ENST00000612404 IGHV3OR16-8A0A075B7F1 116 aa13.52□□□□□ -0.24
SREK1-216ENST00000612404 OR2C1O95371 312 aa13.52□□□□□ -0.24
SREK1-216ENST00000612404 H2AFB1P0C5Y9 115 aa13.52□□□□□ -0.24
SREK1-216ENST00000612404 FAM209BQ5JX69 171 aa13.52□□□□□ -0.24
SREK1-216ENST00000612404 PATE2Q6UY27 113 aa13.52□□□□□ -0.24
SREK1-216ENST00000612404 SSX7Q7RTT5 188 aa13.52□□□□□ -0.24
SREK1-216ENST00000612404 SFT2D1Q8WV19 159 aa13.52□□□□□ -0.24
SREK1-216ENST00000612404 UHRF2Q96PU4 802 aa13.52□□□□□ -0.24
SREK1-216ENST00000612404 SEPSECSQ9HD40 501 aaKnown RBP13.52□□□□□ -0.24
SREK1-216ENST00000612404 BMPR1BO00238 502 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 RHOBP62745 196 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 SPATA31B1PQ5VZV4 182 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 LCN15Q6UWW0 184 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 C18orf65Q6ZTR6 163 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 GATAD1Q8WUU5 269 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 RAB24Q969Q5 203 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 C19orf24Q9BVV8 132 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 HRH4Q9H3N8 390 aa13.52□□□□□ -0.25
SREK1-216ENST00000612404 ELOA3CA0A087WX78 387 aaPredicted RBP13.51□□□□□ -0.25
SREK1-216ENST00000612404 WI2-2373I1.2A0A1W2PRP0 233 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 GGCTO75223 188 aaKnown RBP13.51□□□□□ -0.25
SREK1-216ENST00000612404 CDX1P47902 265 aaPredicted RBP13.51□□□□□ -0.25
SREK1-216ENST00000612404 PLP1P60201 277 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 TOMM20LQ6UXN7 152 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 HIGD1AQ9Y241 93 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 CTXND1A0A1B0GTU2 59 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 NUDT19A8MXV4 375 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 SEC14L6B5MCN3 397 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
SREK1-216ENST00000612404 LINC00305Q7Z4B0 112 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 KLHL30-AS1Q8NEE0 82 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 FUT9Q9Y231 359 aa13.51□□□□□ -0.25
SREK1-216ENST00000612404 A0A1W2PRX2 142 aa13.5□□□□□ -0.25
SREK1-216ENST00000612404 MAP1LC3B2A6NCE7 125 aa13.5□□□□□ -0.25
SREK1-216ENST00000612404 TEX46H3BTG2 121 aa13.5□□□□□ -0.25
SREK1-216ENST00000612404 FGF8P55075 233 aaPredicted RBP13.5□□□□□ -0.25
SREK1-216ENST00000612404 MIR17HGQ75NE6 70 aa13.5□□□□□ -0.25
SREK1-216ENST00000612404 C4orf3Q8WVX3 66 aa13.5□□□□□ -0.25
SREK1-216ENST00000612404 ZNF414Q96IQ9 312 aa13.5□□□□□ -0.25
SREK1-216ENST00000612404 FAM210AQ96ND0 272 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms