RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 SHPKQ9UHJ6 478 aa10.76□□□□□ -0.69
SSBP4-214ENST00000607020 CELA1Q9UNI1 258 aa10.76□□□□□ -0.69
SSBP4-214ENST00000607020 PIGBOS1A0A0B4J2F0 54 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 SFT2D2O95562 160 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 APOHP02749 345 aaPredicted RBP10.75□□□□□ -0.69
SSBP4-214ENST00000607020 C4BPBP20851 252 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 NPY1RP25929 384 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 PRCDQ00LT1 54 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 ASAH1Q13510 395 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 AARDQ4LEZ3 155 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 Q6ZRM9 215 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 LYZL2Q7Z4W2 148 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 C20orf85Q9H1P6 137 aa10.75□□□□□ -0.69
SSBP4-214ENST00000607020 K7EQG2 157 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 IFNA10P01566 189 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 IFNA21P01568 189 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 IFNA17P01571 189 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 TCRBP04435 133 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 ANXA7P20073 488 aaKnown RBP10.74□□□□□ -0.69
SSBP4-214ENST00000607020 IFITM3Q01628 133 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 NMSQ5H8A3 153 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 LRTM2Q8N967 370 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 ZNF114Q8NC26 417 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 GPR146Q96CH1 333 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 PDCD10Q9BUL8 212 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.74□□□□□ -0.69
SSBP4-214ENST00000607020 CACNG5Q9UF02 275 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 HERC1Q15751 4861 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 LRP1BQ9NZR2 4599 aa10.74□□□□□ -0.69
SSBP4-214ENST00000607020 DUXBA0A1W2PPF3 345 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 C9orf170A2RU37 121 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 GNG7O60262 68 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 MT-CO2P00403 227 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 OR4E1P0C645 316 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 RPL11P62913 178 aaKnown RBP10.73□□□□□ -0.69
SSBP4-214ENST00000607020 DHRS2Q13268 280 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 RNF212Q495C1 297 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 SPINK9Q5DT21 86 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 MZT2BQ6NZ67 158 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 SCRT1Q9BWW7 348 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 ZFAND3Q9H8U3 227 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 NUDT15Q9NV35 164 aa10.73□□□□□ -0.69
SSBP4-214ENST00000607020 FAM240BA0A1B0GVZ2 78 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 A0A1W2PS18 150 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 INS-IGF2F8WCM5 200 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 SULT1A3P0DMM9 295 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 SULT1A4P0DMN0 295 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 C4orf46Q504U0 113 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 C1orf134Q5TEV5 83 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 ZNF600Q6ZNG1 722 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 ZNF767PQ75MW2 155 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 OR52E5Q8NH55 327 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 MISP3Q96FF7 219 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 RABAC1Q9UI14 185 aa10.72□□□□□ -0.69
SSBP4-214ENST00000607020 TRAV6A0A075B6T7 132 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 KNCNA6PVL3 124 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 NPBWR1P48145 328 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 HOXA1P49639 335 aaPredicted RBP10.71□□□□□ -0.69
SSBP4-214ENST00000607020 SPCS3P61009 180 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 ERHP84090 104 aaKnown RBP10.71□□□□□ -0.69
SSBP4-214ENST00000607020 SMCO1Q147U7 214 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 COQ8AQ8NI60 647 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 DCANP1Q8TF63 244 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 CLEC5AQ9NY25 188 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 CACFD1Q9UGQ2 172 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 TMED3Q9Y3Q3 217 aa10.71□□□□□ -0.69
SSBP4-214ENST00000607020 PUS1Q9Y606 427 aaKnown RBP eCLIP10.71□□□□□ -0.69
SSBP4-214ENST00000607020 IGLV2-18A0A075B6J9 118 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 A0A1B0GU03 582 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 NPPCP23582 126 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 MAPKAPK5-AS1Q8N8E1 139 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 ENKURQ8TC29 256 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 RAB40CQ96S21 281 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 NEU1Q99519 415 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 C1QTNF4Q9BXJ3 329 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 ENY2Q9NPA8 101 aa10.7□□□□□ -0.7
SSBP4-214ENST00000607020 C16orf90A8MZG2 172 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 TMEM50AO95807 157 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 IGHV3-48P01763 117 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 HOXB5P09067 269 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 H2AFB2P0C5Z0 115 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 SLC25A6P12236 298 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 CRYBB3P26998 211 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 SNCAP37840 140 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 DEFA1P59665 94 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 DEFA3P59666 94 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 ACTL10Q5JWF8 245 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 Q8N1X5 172 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 HSPB7Q9UBY9 170 aa10.69□□□□□ -0.7
SSBP4-214ENST00000607020 TMEM189A5PLL7 270 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 CEBPZOSA8MTT3 80 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 NXPH3O95157 252 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 ZNF688P0C7X2 276 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 SPART-AS1P0CW21 52 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 NUTF2P61970 127 aaKnown RBP10.68□□□□□ -0.7
SSBP4-214ENST00000607020 GGNBP1Q5YKI7 109 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 NRARPQ7Z6K4 114 aa10.68□□□□□ -0.7
SSBP4-214ENST00000607020 UBE2DNLQ8IWF7 75 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms