RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	PSG9	Q00887	426 aa		12.81	□□□□□ -0.36
IRF3-231	ENST00000602190	RRN3P1	Q2M238	152 aa		12.81	□□□□□ -0.36
IRF3-231	ENST00000602190	ARRDC1	Q8N5I2	433 aa		12.81	□□□□□ -0.36
IRF3-231	ENST00000602190	SLC24A4	Q8NFF2	622 aa		12.81	□□□□□ -0.36
IRF3-231	ENST00000602190	KLK11	Q9UBX7	282 aa		12.81	□□□□□ -0.36
IRF3-231	ENST00000602190		A0A0J9YX75	114 aa		12.8	□□□□□ -0.36
IRF3-231	ENST00000602190		M0QYG6	137 aa		12.8	□□□□□ -0.36
IRF3-231	ENST00000602190	IGKV3-20	P01619	116 aa		12.8	□□□□□ -0.36
IRF3-231	ENST00000602190	APOA1	P02647	267 aa		12.8	□□□□□ -0.36
IRF3-231	ENST00000602190	C1orf194	Q5T5A4	169 aa		12.8	□□□□□ -0.36
IRF3-231	ENST00000602190	LHFPL5	Q8TAF8	219 aa		12.8	□□□□□ -0.36
IRF3-231	ENST00000602190	NPIPB3	Q92617	1050 aa		12.8	□□□□□ -0.36
IRF3-231	ENST00000602190	RNF125	Q96EQ8	232 aa		12.8	□□□□□ -0.36
IRF3-231	ENST00000602190	RRNAD1	Q96FB5	475 aa	Known RBP	12.8	□□□□□ -0.36
IRF3-231	ENST00000602190	PLAC8L1	A1L4L8	177 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	LYRM9	A8MSI8	78 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	PGAM2	P15259	253 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	RORC	P51449	518 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	SP6	Q3SY56	376 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	NMS	Q5H8A3	153 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	FAM78B	Q5VT40	261 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	ETFRF1	Q6IPR1	90 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	OR51G1	Q8NGK1	321 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	GLYATL2	Q8WU03	294 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	GPR146	Q96CH1	333 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	TMEM222	Q9H0R3	208 aa		12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.79	□□□□□ -0.36
IRF3-231	ENST00000602190	ISLR	O14498	428 aa		12.78	□□□□□ -0.36
IRF3-231	ENST00000602190	TSPO	P30536	169 aa		12.78	□□□□□ -0.36
IRF3-231	ENST00000602190	ID1	P41134	155 aa		12.78	□□□□□ -0.36
IRF3-231	ENST00000602190	SUPT4H1	P63272	117 aa	Known RBP	12.78	□□□□□ -0.36
IRF3-231	ENST00000602190	TRIM16L	Q309B1	348 aa		12.78	□□□□□ -0.36
IRF3-231	ENST00000602190	IGF2BP2-AS1	Q96M15	143 aa		12.78	□□□□□ -0.36
IRF3-231	ENST00000602190	C17orf77	Q96MU5	243 aa		12.78	□□□□□ -0.36
IRF3-231	ENST00000602190	LINC00588	Q9Y4M8	146 aa		12.78	□□□□□ -0.36
IRF3-231	ENST00000602190	IGKV1D-37	A0A075B6S9	117 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190		F6UB75	175 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	CRX	O43186	299 aa	Predicted RBP	12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	ELK1	P19419	428 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	BTF3	P20290	206 aa	Known RBP	12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	GSG1L	Q6UXU4	331 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	SPATA12	Q7Z6I5	190 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	OR4B1	Q8NGF8	309 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	ABHD1	Q96SE0	405 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	ATG101	Q9BSB4	218 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	KRTAP1-5	Q9BYS1	174 aa		12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	HEYL	Q9NQ87	328 aa	Predicted RBP	12.77	□□□□□ -0.37
IRF3-231	ENST00000602190	TBP	P20226	339 aa		12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	KRTAP10-2	P60368	255 aa		12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	RNASE10	Q5GAN6	216 aa	Known RBP	12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	SNX29P2	Q8IUI4	249 aa		12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	CCDC71L	Q8N9Z2	235 aa		12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	RBPMS	Q93062	196 aa	Known RBP	12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	YIPF6	Q96EC8	236 aa		12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	LINC00052	Q96N35	136 aa		12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	CACNG5	Q9UF02	275 aa		12.76	□□□□□ -0.37
IRF3-231	ENST00000602190	CD3D	P04234	171 aa		12.75	□□□□□ -0.37
IRF3-231	ENST00000602190	NEDD8	Q15843	81 aa		12.75	□□□□□ -0.37
IRF3-231	ENST00000602190	OR13C8	Q8NGS7	320 aa		12.75	□□□□□ -0.37
IRF3-231	ENST00000602190	TERB2	Q8NHR7	220 aa		12.75	□□□□□ -0.37
IRF3-231	ENST00000602190	ZFAND1	Q8TCF1	268 aa		12.75	□□□□□ -0.37
IRF3-231	ENST00000602190	C20orf173	Q96LM9	149 aa		12.75	□□□□□ -0.37
IRF3-231	ENST00000602190	COPZ2	Q9P299	210 aa		12.75	□□□□□ -0.37
IRF3-231	ENST00000602190	OR5AC1	P0C628	307 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	SAMD13	Q5VXD3	122 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	NOXA1	Q86UR1	476 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	SELENOH	Q8IZQ5	122 aa	Known RBP	12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	OR4D10	Q8NGI6	311 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	COQ8A	Q8NI60	647 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	ACY3	Q96HD9	319 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	C7orf50	Q9BRJ6	194 aa	Known RBP	12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	DOK5	Q9P104	306 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	MTFP1	Q9UDX5	166 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	PFDN2	Q9UHV9	154 aa		12.74	□□□□□ -0.37
IRF3-231	ENST00000602190	SMIM31	A0A1B0GVY4	71 aa		12.73	□□□□□ -0.37
IRF3-231	ENST00000602190	EBLN2	Q6P2I7	272 aa		12.73	□□□□□ -0.37
IRF3-231	ENST00000602190	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.73	□□□□□ -0.37
IRF3-231	ENST00000602190	MAGT1	Q9H0U3	335 aa		12.73	□□□□□ -0.37
IRF3-231	ENST00000602190	CCL18	P55774	89 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190	ZNF90	Q03938	601 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190	RNF141	Q8WVD5	230 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190		Q9H3A6	140 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190	RPRM	Q9NS64	109 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190	COMMD3	Q9UBI1	195 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190	CACFD1	Q9UGQ2	172 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190	TMEM56-RWDD3	S4R434	201 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190		U3KQ87	197 aa		12.72	□□□□□ -0.37
IRF3-231	ENST00000602190	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	CEBPZOS	A8MTT3	80 aa		12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	PRM2	P04554	102 aa		12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	MEOX2	P50222	304 aa		12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	B2M	P61769	119 aa		12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	KLF9	Q13886	244 aa	Predicted RBP	12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	OR52I2	Q8NH67	350 aa		12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	RNASE11	Q8TAA1	199 aa	Known RBP	12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	MARCH1	Q8TCQ1	289 aa		12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	UPK3B	Q9BT76	320 aa		12.71	□□□□□ -0.37
IRF3-231	ENST00000602190	MYCBP2	O75592	4640 aa		12.71	□□□□□ -0.38
IRF3-231	ENST00000602190	CBY3	A6NI87	242 aa		12.7	□□□□□ -0.38
IRF3-231	ENST00000602190	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.7	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms