RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 RPH3ALQ9UNE2 315 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 CORTO00230 105 aa16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 LGALS7P47929 136 aa16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 MIEN1Q9BRT3 115 aa16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 DIRC3C9JPN6 131 aa16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 ZNF324O75467 553 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 SLC25A5P05141 298 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 CRYGCP07315 174 aa16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 TCF15Q12870 199 aa16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 PERPQ96FX8 193 aa16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 GSX1Q9H4S2 264 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-225ENST00000600733 IGHV1-69-2A0A0G2JMI3 117 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 PGPA6NDG6 321 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 VSTM5A8MXK1 200 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 RPL27AP46776 148 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 UBE2G1P62253 170 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 LEMD1Q68G75 181 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 GRAMD2BQ96HH9 432 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 NEU1Q99519 415 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 C7orf69Q9H7B7 122 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 EPDR1Q9UM22 224 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 LRBAP50851 2863 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 H3BTX0 84 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 ETFRF1Q6IPR1 90 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 C18orf32Q8TCD1 76 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 TSKUQ8WUA8 353 aa16.19■□□□□ 0.18
SHKBP1-225ENST00000600733 HIGD1CA8MV81 97 aa16.18■□□□□ 0.18
SHKBP1-225ENST00000600733 LYNX1G3V0Z9 82 aa16.18■□□□□ 0.18
SHKBP1-225ENST00000600733 LYNX1P0DP58 116 aa16.18■□□□□ 0.18
SHKBP1-225ENST00000600733 PRR31Q5SQ13 230 aa16.18■□□□□ 0.18
SHKBP1-225ENST00000600733 SPACA3Q8IXA5 215 aa16.18■□□□□ 0.18
SHKBP1-225ENST00000600733 WIPF2Q8TF74 440 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-225ENST00000600733 IGHV2-26A0A0B4J1V2 119 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 FAM87AP0C7U9 286 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 NIT1Q86X76 327 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 TEX45Q8NA69 505 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 TRGV9Q99603 122 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 SSBP4Q9BWG4 385 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 DCHS2Q6V1P9 2916 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 VWC2LB2RUY7 222 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 NBEAP1P0C6P0 100 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 NTF3P20783 257 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 SIGLEC9Q9Y336 463 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 RELNP78509 3460 aa16.17■□□□□ 0.18
SHKBP1-225ENST00000600733 GPR6P46095 362 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-225ENST00000600733 CAMPP49913 170 aa16.16■□□□□ 0.18
SHKBP1-225ENST00000600733 PVRIGQ6DKI7 326 aa16.16■□□□□ 0.18
SHKBP1-225ENST00000600733 TMEM116Q8NCL8 245 aa16.16■□□□□ 0.18
SHKBP1-225ENST00000600733 STXBP6Q8NFX7 210 aa16.16■□□□□ 0.18
SHKBP1-225ENST00000600733 CRYGBP07316 175 aa16.16■□□□□ 0.18
SHKBP1-225ENST00000600733 HIST1H1EP10412 219 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-225ENST00000600733 C22orf15Q8WYQ4 148 aa16.16■□□□□ 0.18
SHKBP1-225ENST00000600733 HYPMO75409 117 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 IGLV1-47P01700 117 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 C3orf79P0CE67 100 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 G0S2P27469 103 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 RASL11AQ6T310 242 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 LINC00322Q6ZN03 302 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 ZNF835Q9Y2P0 537 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 INSIG2Q9Y5U4 225 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 TLN1Q9Y490 2541 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 IGHV1-3A0A0C4DH29 117 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 GP9P14770 177 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 KLF12Q9Y4X4 402 aa16.15■□□□□ 0.18
SHKBP1-225ENST00000600733 CEP295Q9C0D2 2601 aa16.14■□□□□ 0.17
SHKBP1-225ENST00000600733 OR4B1Q8NGF8 309 aa16.14■□□□□ 0.17
SHKBP1-225ENST00000600733 NGBQ9NPG2 151 aa16.14■□□□□ 0.17
SHKBP1-225ENST00000600733 RALYQ9UKM9 306 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-225ENST00000600733 TCF24Q7RTU0 167 aa16.14■□□□□ 0.17
SHKBP1-225ENST00000600733 GPR82Q96P67 336 aa16.14■□□□□ 0.17
SHKBP1-225ENST00000600733 TEX22C9J3V5 150 aa16.13■□□□□ 0.17
SHKBP1-225ENST00000600733 BUB1B-PAK6H3BSN5 160 aa16.13■□□□□ 0.17
SHKBP1-225ENST00000600733 COX7A1P24310 79 aa16.13■□□□□ 0.17
SHKBP1-225ENST00000600733 SSX8Q7RTT4 187 aa16.13■□□□□ 0.17
SHKBP1-225ENST00000600733 PPP1R27Q86WC6 154 aa16.13■□□□□ 0.17
SHKBP1-225ENST00000600733 MLST8Q9BVC4 326 aa16.13■□□□□ 0.17
SHKBP1-225ENST00000600733 FBXL15Q9H469 300 aa16.13■□□□□ 0.17
SHKBP1-225ENST00000600733 PTPRZ1P23471 2315 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-225ENST00000600733 APOBEC3AP31941 199 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 CTRLP40313 264 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 PRRX1P54821 245 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 CASP6P55212 293 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 CHRDL1Q9BU40 450 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 WNT10AQ9GZT5 417 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 Q9H3A6 140 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 MRPL27Q9P0M9 148 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 F11RQ9Y624 299 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 SPATA45Q537H7 98 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 C8orf46Q8TAG6 207 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 TNFRSF14Q92956 283 aa16.12■□□□□ 0.17
SHKBP1-225ENST00000600733 A6NNC1 897 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 M0QZK8 103 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 C5orf17Q8NAS9 161 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 OR2D3Q8NGH3 330 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 ALKBH7Q9BT30 221 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 CLEC7AQ9BXN2 247 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 CSMD1Q96PZ7 3565 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 MUC6Q6W4X9 2439 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 PSG1P11464 419 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms