RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 PSG1P11464 419 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 PVALBP20472 110 aaPredicted RBP8.32□□□□□ -1.08
LIG1-211ENST00000596457 BMI1P35226 326 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 CAV2P51636 162 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 LYZP61626 148 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 ACOT7LQ6ZUV0 252 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 TCF24Q7RTU0 167 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 LILRB2Q8N423 598 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 DEFB125Q8N687 156 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 OR10P1Q8NGE3 313 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 WFDC10AQ9H1F0 79 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 IGKV1D-37A0A075B6S9 117 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 A0A1W2PS18 150 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 PMS2P5A8MQ11 134 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 OR11H12B2RN74 326 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 PRSS46E5RG02 174 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 TSC22D2O75157 780 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 DFFBO76075 338 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 FABP1P07148 127 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 TAS2R30P59541 319 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 USF2Q15853 346 aaPredicted RBP8.31□□□□□ -1.08
LIG1-211ENST00000596457 LRRC37A5PQ49AS3 106 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 TMEM14EPQ6UXP3 125 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 GRAMD2BQ96HH9 432 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 TMEM231Q9H6L2 316 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 MGAT4CQ9UBM8 478 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 RABAC1Q9UI14 185 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 ALG5Q9Y673 324 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 SORL1Q92673 2214 aa8.31□□□□□ -1.08
LIG1-211ENST00000596457 DNASE2O00115 360 aaPredicted RBP8.3□□□□□ -1.08
LIG1-211ENST00000596457 TSPAN4O14817 238 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 PTTG1O95997 202 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 RLN2P04090 185 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 GATA2P23769 480 aaPredicted RBP8.3□□□□□ -1.08
LIG1-211ENST00000596457 CRYBB3P26998 211 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 P2RY1P47900 373 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 PAFAH1B2P68402 229 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 ARL16Q0P5N6 197 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 SBSPONQ8IVN8 264 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 PPP1R14BQ96C90 147 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 TRGV9Q99603 122 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 SPAG8Q99932 426 aaPredicted RBP8.3□□□□□ -1.08
LIG1-211ENST00000596457 VSIRQ9H7M9 311 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 SRD5A3Q9H8P0 318 aa8.3□□□□□ -1.08
LIG1-211ENST00000596457 IGKV1OR2-108A0A075B7D4 117 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 OR4C46A6NHA9 309 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 CST7O76096 145 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 DLK1P80370 383 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 IL15RAQ13261 267 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 TMEM217Q8N7C4 229 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 THAP8Q8NA92 274 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 STXBP6Q8NFX7 210 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 NMES1Q9C002 83 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 NPVFQ9HCQ7 196 aa8.29□□□□□ -1.08
LIG1-211ENST00000596457 IGSF23A1L1A6 192 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 ORM2P19652 201 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 EIF2B2P49770 351 aaKnown RBP8.28□□□□□ -1.08
LIG1-211ENST00000596457 CYCSP99999 105 aaKnown RBP8.28□□□□□ -1.08
LIG1-211ENST00000596457 SLC38A11Q08AI6 406 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 FAM90A2PQ658T7 463 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 C16orf54Q6UWD8 224 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 TMEM182Q6ZP80 229 aaPredicted RBP8.28□□□□□ -1.08
LIG1-211ENST00000596457 CYP2G1PQ6ZSU1 146 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 TMEM144Q7Z5S9 345 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 BPIFCQ8NFQ6 507 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 OR1B1Q8NGR6 318 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 MS4A6AQ9H2W1 248 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 C11orf1Q9H5F2 150 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 C19orf73Q9NVV2 129 aa8.28□□□□□ -1.08
LIG1-211ENST00000596457 TENM3Q9P273 2699 aa8.27□□□□□ -1.08
LIG1-211ENST00000596457 DEDDO75618 318 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 CD5P06127 495 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 H2BFSP57053 126 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 RGS21Q2M5E4 152 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 STX12Q86Y82 276 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 APRG1Q8IVJ8 170 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 TMEM252Q8N6L7 170 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 WWC2-AS2Q96NR7 200 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 MED28Q9H204 178 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 LYRM2Q9NU23 88 aaPredicted RBP8.27□□□□□ -1.09
LIG1-211ENST00000596457 OR5AC2Q9NZP5 309 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 DOK5Q9P104 306 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 U3KQE9 123 aa8.27□□□□□ -1.09
LIG1-211ENST00000596457 RBMY1BA6NDE4 496 aaKnown RBP8.26□□□□□ -1.09
LIG1-211ENST00000596457 RBMY1EA6NEQ0 496 aaKnown RBP8.26□□□□□ -1.09
LIG1-211ENST00000596457 A8MZ25 164 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 E5RGE8 158 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 RBMY1DP0C7P1 496 aaKnown RBP8.26□□□□□ -1.09
LIG1-211ENST00000596457 SULT1A1P50225 295 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 ZNF124Q15973 351 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 TEPPQ6URK8 271 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 SIGLEC15Q6ZMC9 328 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 PPP1R1CQ8WVI7 109 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 ZMAT4Q9H898 229 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 SLC25A22Q9H936 323 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 PFDN2Q9UHV9 154 aa8.26□□□□□ -1.09
LIG1-211ENST00000596457 HELTA6NFD8 242 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 H0YIZ8 118 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 BUB3O43684 328 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms