RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 C9JAW5 83 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 TMEM250H0YL14 139 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 M0R143 59 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 PIRO00625 290 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF207O43670 478 aaKnown RBP3.33□□□□□ -1.88
SMAD4-216ENST00000593223 GNG7O60262 68 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 OR2H2O95918 312 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 CTSEP14091 401 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF30P17039 623 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF138P52744 262 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 MP68P56378 58 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 UBE2NP61088 152 aaKnown RBP3.33□□□□□ -1.88
SMAD4-216ENST00000593223 UBE2NLQ5JXB2 153 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 LCN12Q6JVE5 192 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 SCIMPQ6UWF3 145 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 TEX261Q6UWH6 196 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 CLEC20AQ6ZU45 233 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 HSD17B13Q7Z5P4 300 aaPredicted RBP3.33□□□□□ -1.88
SMAD4-216ENST00000593223 TCTE3Q8IZS6 198 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 OR8I2Q8N0Y5 310 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF433Q8N7K0 673 aaPredicted RBP3.33□□□□□ -1.88
SMAD4-216ENST00000593223 OR5W2Q8NH69 310 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 NMNAT3Q96T66 252 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 NRIP2Q9BQI9 281 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 SMIM3Q9BZL3 60 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 DHCR7Q9UBM7 475 aaKnown RBP3.33□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF230Q9UIE0 474 aaPredicted RBP3.33□□□□□ -1.88
SMAD4-216ENST00000593223 HIGD1AQ9Y241 93 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 POMPQ9Y244 141 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 HS3ST2Q9Y278 367 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 RYR1P21817 5038 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 PRRC2CQ9Y520 2896 aaKnown RBP3.33□□□□□ -1.88
SMAD4-216ENST00000593223 KIAA1549LQ6ZVL6 1849 aa3.33□□□□□ -1.88
SMAD4-216ENST00000593223 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 TRAV5A0A0B4J249 113 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 TRAV38-1A0A0B4J264 116 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 IGHV1-69-2A0A0G2JMI3 117 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 FABP5P3A8MUU1 101 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 J3QR89 54 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF780AO75290 641 aaPredicted RBP3.32□□□□□ -1.88
SMAD4-216ENST00000593223 OPN1SWP03999 348 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 OR4Q2P0C623 313 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 FGF7P21781 194 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 BTCP35070 178 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 PPP1CCP36873 323 aaKnown RBP3.32□□□□□ -1.88
SMAD4-216ENST00000593223 HBA1P69905 142 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 ENDOGQ14249 297 aaKnown RBP3.32□□□□□ -1.88
SMAD4-216ENST00000593223 MMDQ15546 238 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 ABCA11PQ4W5N1 156 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 FBXW12Q6X9E4 464 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF493Q6ZR52 646 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 RNF165Q6ZSG1 346 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 ATP5L2Q7Z4Y8 100 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 CROCCP2Q86T23 111 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 LINC00337Q8N6G1 96 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 TCTEX1D1Q8N7M0 179 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 OR51T1Q8NGJ9 327 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF418Q8TF45 676 aaPredicted RBP3.32□□□□□ -1.88
SMAD4-216ENST00000593223 SFT2D1Q8WV19 159 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 DCAKDQ8WVC6 231 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 PSMG3Q9BT73 122 aaPredicted RBP3.32□□□□□ -1.88
SMAD4-216ENST00000593223 OR8D2Q9GZM6 311 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 PARP11Q9NR21 331 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 RBM12B-AS1Q9P1G2 102 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 SLC23A2Q9UGH3 650 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 PRO0461Q9UI25 63 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 MED31Q9Y3C7 131 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 NFASCO94856 1347 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 PLXND1Q9Y4D7 1925 aa3.32□□□□□ -1.88
SMAD4-216ENST00000593223 TMED7-TICAM2A0A0A6YYA0 188 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 TRAV4A0A0B4J268 109 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 CIB4A0PJX0 185 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 K7EM74 188 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 ISLRO14498 428 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 OR7C2O60412 319 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 APOMO95445 188 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 IGLV1-47P01700 117 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 BCL2P10415 239 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 GABRA2P47869 451 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 ATP5G3P48201 142 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 INPP1P49441 399 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 PSMB3P49720 205 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 TDGF1P3P51864 188 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 PPP1CAP62136 330 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 RPS25P62851 125 aaKnown RBP3.31□□□□□ -1.88
SMAD4-216ENST00000593223 GNA12Q03113 381 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 NXNL2Q5VZ03 156 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 ACP7Q6ZNF0 438 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 EXOC3-AS1Q8N2X6 119 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 C12orf45Q8N5I9 185 aaPredicted RBP3.31□□□□□ -1.88
SMAD4-216ENST00000593223 OR52R1Q8NGF1 315 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 OR52P1PQ8NH57 321 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 TWIST2Q8WVJ9 160 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 TMEM106AQ96A25 262 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 MS4A6EQ96DS6 147 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 IP6K3Q96PC2 410 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 LINC01587Q99440 93 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 ANAPC13Q9BS18 74 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 RTL8AQ9BWD3 113 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 SAMD10Q9BYL1 202 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms