RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 GATA3P23771 443 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 S4R3C0 116 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 TRGV2A0A075B6R0 118 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 H0YIZ8 118 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 LINC00518Q8N0U6 118 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 DMRTA2Q96SC8 542 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 A0A1B0GW64 132 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 HIGD1CA8MV81 97 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 SELLP14151 372 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 TMEM200BQ69YZ2 307 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 IGFL3Q6UXB1 125 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 MBNL3Q9NUK0 354 aaKnown RBP12.07□□□□□ -0.48
RAVER1-204ENST00000592208 CSPG4Q6UVK1 2322 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 STAG3L3P0CL85 134 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 CD24P25063 80 aa12.07□□□□□ -0.48
RAVER1-204ENST00000592208 SLC17A3O00476 420 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 ORMDL2Q53FV1 153 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 DTX2Q86UW9 622 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 IGHV1-3A0A0C4DH29 117 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 TCF15Q12870 199 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 VMO1Q7Z5L0 202 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 GATA2P23769 480 aaPredicted RBP12.06□□□□□ -0.48
RAVER1-204ENST00000592208 CFPP27918 469 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 ST20Q9HBF5 79 aa12.06□□□□□ -0.48
RAVER1-204ENST00000592208 TP53BP1Q12888 1972 aaPredicted RBP12.06□□□□□ -0.48
RAVER1-204ENST00000592208 TRBV7-1A0A0A6YYK4 115 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 PSPNO60542 156 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 RNASE4P34096 147 aaKnown RBP12.05□□□□□ -0.48
RAVER1-204ENST00000592208 PLP1P60201 277 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 NMSQ5H8A3 153 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 LYPD1Q8N2G4 141 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 PRDM13Q9H4Q3 707 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 IGKV1D-8A0A087WSZ0 117 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 IGHV3-66A0A0C4DH42 116 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 SMIM13P0DJ93 91 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 MRAP2Q96G30 205 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 TMEM160Q9NX00 188 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 SONP18583 2426 aaKnown RBP12.05□□□□□ -0.48
RAVER1-204ENST00000592208 TMEM50AO95807 157 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 TREML4Q6UXN2 200 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 TMEM14EPQ6UXP3 125 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 C9orf139Q6ZV77 190 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 PEF1Q9UBV8 284 aaKnown RBP12.05□□□□□ -0.48
RAVER1-204ENST00000592208 C5orf64Q2M2E5 130 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 LY96Q9Y6Y9 160 aa12.05□□□□□ -0.48
RAVER1-204ENST00000592208 SRSF1Q07955 248 aaKnown RBP eCLIP12.04□□□□□ -0.48
RAVER1-204ENST00000592208 OR10J3Q5JRS4 329 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 GNB1LQ9BYB4 327 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 IGKV1-27A0A075B6S5 117 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 IFI27P40305 119 aaPredicted RBP12.04□□□□□ -0.48
RAVER1-204ENST00000592208 PLAURQ03405 335 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 GGTLC1Q9BX51 225 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 C5orf63A6NC05 138 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 RPRMLQ8N4K4 120 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 CD177Q8N6Q3 437 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 TSKUQ8WUA8 353 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 CD7P09564 240 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 JKAMPQ9P055 326 aa12.04□□□□□ -0.48
RAVER1-204ENST00000592208 MYO18BQ8IUG5 2567 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 PRTN3P24158 256 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 Q6P435 159 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 PARD6GQ9BYG4 376 aaPredicted RBP12.03□□□□□ -0.48
RAVER1-204ENST00000592208 HEATR5AQ86XA9 2040 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 PSMB11A5LHX3 300 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 C21orf62-AS1Q17RA5 79 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 CYSLTR1Q9Y271 337 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 H7C2G1 150 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 SIGLEC15Q6ZMC9 328 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 VOPP1Q96AW1 172 aa12.03□□□□□ -0.48
RAVER1-204ENST00000592208 VCX2Q9H322 139 aa12.02□□□□□ -0.48
RAVER1-204ENST00000592208 CNTFRP26992 372 aa12.02□□□□□ -0.49
RAVER1-204ENST00000592208 GTSCR1Q86UQ5 136 aa12.02□□□□□ -0.49
RAVER1-204ENST00000592208 F11RQ9Y624 299 aaKnown RBP12.02□□□□□ -0.49
RAVER1-204ENST00000592208 LY6HO94772 140 aa12.02□□□□□ -0.49
RAVER1-204ENST00000592208 QRFPP83859 136 aa12.02□□□□□ -0.49
RAVER1-204ENST00000592208 GAFA1Q96PS6 74 aa12.02□□□□□ -0.49
RAVER1-204ENST00000592208 CRIM1Q9NZV1 1036 aa12.02□□□□□ -0.49
RAVER1-204ENST00000592208 ANKHD1Q8IWZ3 2542 aaKnown RBP12.01□□□□□ -0.49
RAVER1-204ENST00000592208 TRBV24-1A0A075B6N3 115 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 IGHV3OR16-8A0A075B7F1 116 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 TRAV8-6A0A0B4J262 113 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 FAM223BA6NKX1 122 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 HBDP02042 147 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 SCGB1A1P11684 91 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 SRSF4Q08170 494 aaKnown RBP12.01□□□□□ -0.49
RAVER1-204ENST00000592208 CFAP161Q6P656 301 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 TEX38Q6PEX7 206 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 FAM223AQ8IWN6 122 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 CHCHD1Q96BP2 118 aaKnown RBP12.01□□□□□ -0.49
RAVER1-204ENST00000592208 PRO3102Q9H379 93 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 H0YJW9 148 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 CD55P08174 381 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 SUPT4H1P63272 117 aaKnown RBP12.01□□□□□ -0.49
RAVER1-204ENST00000592208 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 OR5AN1Q8NGI8 311 aa12.01□□□□□ -0.49
RAVER1-204ENST00000592208 FOXC2Q99958 501 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms