RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 GP9P14770 177 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 CRISP2P16562 243 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 LYZP61626 148 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 KLRD1Q13241 179 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 HES1Q14469 280 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 C5orf17Q8NAS9 161 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 LINC00479Q96M42 142 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 PRORYQ9H606 182 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 TMEM14CQ9P0S9 112 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 KLF12Q9Y4X4 402 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 DCHS1Q96JQ0 3298 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 ABCA4P78363 2273 aa15.21■□□□□ 0.03
PRKCSH-209ENST00000589838 RD3LP0DJH9 198 aa15.21■□□□□ 0.03
PRKCSH-209ENST00000589838 GZMBP10144 247 aa15.21■□□□□ 0.03
PRKCSH-209ENST00000589838 C5orf64Q2M2E5 130 aa15.21■□□□□ 0.03
PRKCSH-209ENST00000589838 LHFPL4Q7Z7J7 247 aa15.21■□□□□ 0.03
PRKCSH-209ENST00000589838 RNF24Q9Y225 148 aa15.21■□□□□ 0.03
PRKCSH-209ENST00000589838 IZUMO1RA6ND01 250 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 PKIAP61925 76 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 LY6DQ14210 128 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 VMO1Q7Z5L0 202 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 GRAMD2BQ96HH9 432 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 ATG101Q9BSB4 218 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 TSTD3H0UI37 97 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 AMY1AP04745 511 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 S100A7AQ86SG5 101 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 FMC1Q96HJ9 113 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 TMEM68Q96MH6 324 aa15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 GSX1Q9H4S2 264 aaPredicted RBP15.2■□□□□ 0.02
PRKCSH-209ENST00000589838 TRAV30A0A087WSZ9 112 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 TRAV34A0A0B4J273 112 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 K7EIM0 57 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 HIST1H1EP10412 219 aaKnown RBP15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 PAFAH1B2P68402 229 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 Q0VG73 95 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 RASL11AQ6T310 242 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 NHLRC2Q8NBF2 726 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 GPR82Q96P67 336 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 SLC25A39Q9BZJ4 359 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 MRPL27Q9P0M9 148 aaKnown RBP15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 NAT8BQ9UHF3 227 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 KALRNO60229 2985 aa15.19■□□□□ 0.02
PRKCSH-209ENST00000589838 A6NNC1 897 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 HLA-DQA1P01909 254 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 GNG5P63218 68 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 ZNF562Q6V9R5 426 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 ZNF600Q6ZNG1 722 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 TMEM256Q8N2U0 113 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 CMTM2Q8TAZ6 248 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 RBM14Q96PK6 669 aaKnown RBP15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 Q9H3A6 140 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 OTORQ9NRC9 128 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 NPIPB5A8MRT5 1133 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 IGKV1-17P01599 117 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 ESDP10768 282 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 EFNA4P52798 201 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 TCL1AP56279 114 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 NUDT10Q8NFP7 164 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 MBD6Q96DN6 1003 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 NUDT11Q96G61 164 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 UBTD1Q9HAC8 227 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 ZNF331Q9NQX6 463 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 IGF2RP11717 2491 aa15.18■□□□□ 0.02
PRKCSH-209ENST00000589838 TPRP12270 2363 aaKnown RBP15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 A0A1W2PRD5 423 aa15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 A0A1W2PRF3 423 aa15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 A0A1W2PRM7 423 aa15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 TOMM40O96008 361 aa15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 CDKN1AP38936 164 aa15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 TPPP2P59282 170 aa15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 EBI3Q14213 229 aa15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 USF2Q15853 346 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 TMEM136Q6ZRR5 245 aa15.17■□□□□ 0.02
PRKCSH-209ENST00000589838 TRAV20A0A0B4J274 112 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 GRIFINA4D1Z8 144 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 HOXB4P17483 251 aaPredicted RBP15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 IQCJQ1A5X6 159 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 TBL2Q9Y4P3 447 aaKnown RBP15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 ARHGAP32A7KAX9 2087 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 SPINK4O60575 86 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 TCRAP04437 139 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 SNRPCP09234 159 aaKnown RBP15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 RAB4BP61018 213 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 LEMD1Q68G75 181 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 BAGE3Q86Y29 109 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 WIPF2Q8TF74 440 aaPredicted RBP15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 ARPC1AQ92747 370 aa15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 ZNF48Q96MX3 618 aaPredicted RBP15.16■□□□□ 0.02
PRKCSH-209ENST00000589838 NCBP2LA6PVI3 153 aaKnown RBP15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 CD24P25063 80 aa15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 ZFP36P26651 326 aaKnown RBP15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 MFAP4P55083 255 aa15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 BPIFA4PQ86YQ2 179 aa15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 TTC9CQ8N5M4 171 aa15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 Q8N6K4 173 aa15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 ITLN2Q8WWU7 325 aaPredicted RBP15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 SHANK2-AS3Q9BTD1 123 aa15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 SIRPDQ9H106 197 aa15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 RPH3ALQ9UNE2 315 aa15.15■□□□□ 0.02
PRKCSH-209ENST00000589838 A0A1W2PPR1 153 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms