RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 A8MWL6 223 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 TMEM30BQ3MIR4 351 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 FAM19A2Q8N3H0 131 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
RETREG3-208ENST00000589797 ACANP16112 2415 aa11.83□□□□□ -0.51
RETREG3-208ENST00000589797 CEACAM4O75871 244 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
RETREG3-208ENST00000589797 TCF24Q7RTU0 167 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 TXNDC17Q9BRA2 123 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 A0A1W2PPI3 338 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 PEX7O00628 323 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 TGFAP01135 160 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 PSG1P11464 419 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 NCKAP5O14513 1909 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 IGLV2-14P01704 120 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 SOD3P08294 240 aa11.83□□□□□ -0.52
RETREG3-208ENST00000589797 RNASE2P10153 161 aaKnown RBP11.83□□□□□ -0.52
RETREG3-208ENST00000589797 TRAV40A0A0B4J280 105 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 F5H697 171 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 PDLIM4P50479 330 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 LINC01551Q86U37 167 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 Q8NA96 180 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 SCRT1Q9BWW7 348 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 BUB1B-PAK6H3BSN5 160 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 SLX1AQ9BQ83 275 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 GATA4P43694 442 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 SIGLEC9Q9Y336 463 aa11.82□□□□□ -0.52
RETREG3-208ENST00000589797 PMS2P5A8MQ11 134 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 COX6B1P14854 86 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 FCER1GP30273 86 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 VMO1Q7Z5L0 202 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 RNASEH2CQ8TDP1 164 aaKnown RBP11.81□□□□□ -0.52
RETREG3-208ENST00000589797 TCRBV4S1A1TA0A5B7 111 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 PROP1O75360 226 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 VENTXO95231 258 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 GZMBP10144 247 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 Q9H3A6 140 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 TRAV1-1A0A0B4J248 108 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 GPX4P36969 197 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-208ENST00000589797 WT1-ASQ06250 92 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 OR5R1Q8NH85 324 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 C16orf92Q96LL3 132 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 PIMREGQ9BSJ6 248 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
RETREG3-208ENST00000589797 A0A1B0GUS0 222 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 SMAD7O15105 426 aaKnown RBP11.8□□□□□ -0.52
RETREG3-208ENST00000589797 GGCTO75223 188 aaKnown RBP11.8□□□□□ -0.52
RETREG3-208ENST00000589797 TRGV3P03979 118 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 CFHR2P36980 270 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 OR5AL1P0C617 328 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 VDAC2P45880 294 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-208ENST00000589797 CX3CL1P78423 397 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 TEX38Q6PEX7 206 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 A0A087WWC5 75 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 TMEM155Q4W5P6 130 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 ZNF257Q9Y2Q1 563 aa11.8□□□□□ -0.52
RETREG3-208ENST00000589797 SHISA9B4DS77 424 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 RNF224P0DH78 156 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 RPL15P61313 204 aaKnown RBP11.79□□□□□ -0.52
RETREG3-208ENST00000589797 TMEM167AQ8TBQ9 72 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 RELQ04864 619 aaPredicted RBP11.79□□□□□ -0.52
RETREG3-208ENST00000589797 C2orf83Q53S99 150 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 ST6GALNAC3Q8NDV1 305 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 MRPL32Q9BYC8 188 aaKnown RBP11.79□□□□□ -0.52
RETREG3-208ENST00000589797 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 M0R3E3 92 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 BMPR1BO00238 502 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
RETREG3-208ENST00000589797 TWIST1Q15672 202 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 ZNF114Q8NC26 417 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 OR8A1Q8NGG7 326 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 RITA1Q96K30 269 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 C19orf24Q9BVV8 132 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 ZNF292O60281 2723 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 HCFC1P51610 2035 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 ISLRO14498 428 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 SRD5A1P18405 259 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 TEX45Q8NA69 505 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 DPF1Q92782 380 aa11.79□□□□□ -0.52
RETREG3-208ENST00000589797 HOXA5P20719 270 aa11.78□□□□□ -0.52
RETREG3-208ENST00000589797 WFDC12Q8WWY7 111 aa11.78□□□□□ -0.52
RETREG3-208ENST00000589797 IL36BQ9NZH7 164 aa11.78□□□□□ -0.52
RETREG3-208ENST00000589797 ATG2AQ2TAZ0 1938 aa11.78□□□□□ -0.52
RETREG3-208ENST00000589797 RHOGP84095 191 aa11.78□□□□□ -0.52
RETREG3-208ENST00000589797 RNF125Q96EQ8 232 aa11.78□□□□□ -0.52
RETREG3-208ENST00000589797 TMEM189A5PLL7 270 aa11.78□□□□□ -0.52
RETREG3-208ENST00000589797 DSCAMO60469 2012 aa11.78□□□□□ -0.52
RETREG3-208ENST00000589797 LINC00587B1AMM8 73 aa11.77□□□□□ -0.52
RETREG3-208ENST00000589797 SSBP2P81877 361 aaPredicted RBP11.77□□□□□ -0.52
RETREG3-208ENST00000589797 C11orf44Q8N8P7 122 aa11.77□□□□□ -0.52
RETREG3-208ENST00000589797 ZNF738Q8NE65 137 aa11.77□□□□□ -0.52
RETREG3-208ENST00000589797 Q8TCH9 128 aa11.77□□□□□ -0.52
RETREG3-208ENST00000589797 C22orf46C9J442 243 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 MAS1LP35410 378 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 ZNF600Q6ZNG1 722 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 OR4B1Q8NGF8 309 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 GLMPQ8WWB7 406 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms