RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 GGACTQ9BVM4 153 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 NAA60Q9H7X0 242 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 GPN1Q9HCN4 374 aaPredicted RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 PARP11Q9NR21 331 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 DPM3Q9P2X0 92 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 METTL1Q9UBP6 276 aaKnown RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 IGLV9-49A0A0B4J1Y8 123 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 FAM24AA6NFZ4 105 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 FBLL1A6NHQ2 334 aaKnown RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 TCF21O43680 179 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 IFNA21P01568 189 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 APOC3P02656 99 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SAA1P0DJI8 122 aaPredicted RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 FOLR2P14207 255 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 RAB5BP61020 215 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 PKIAP61925 76 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 CATR1Q13166 79 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 VAX1Q5SQQ9 334 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 ZNF645Q8N7E2 425 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 MITD1Q8WV92 249 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 DCUN1D4Q92564 292 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SLC25A21Q9BQT8 299 aaPredicted RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 OR5AC2Q9NZP5 309 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 COMMD9Q9P000 198 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 JPT1Q9UK76 154 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 AKAP9Q99996 3911 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 A0A0B4J2A0 478 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 A0A1W2PS18 150 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 C5orf52A6NGY3 159 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 MSGN1A6NI15 193 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 C1orf196B1AJZ1 125 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 F5H0A9 414 aaPredicted RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 NPFFO15130 113 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SCGB2A1O75556 95 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 YIF1AO95070 293 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SFT2D2O95562 160 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 IGKV1-5P01602 117 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 APOA2P02652 100 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 OR13C7P0DN81 318 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 GATA2P23769 480 aaPredicted RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 PRTN3P24158 256 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 CEACAM3P40198 252 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 ERVK-16P61578 105 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 DHRS7BQ6IAN0 325 aaPredicted RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 OR4A47Q6IF82 309 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 DHRS11Q6UWP2 260 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SLC25A48Q6ZT89 311 aaKnown RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 MOB1BQ7L9L4 216 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 LINC00596Q86U02 117 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SLC25A42Q86VD7 318 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 LHFPL1Q86WI0 220 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SIGLECL1Q8N7X8 197 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 CCDC71LQ8N9Z2 235 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 HSD17B11Q8NBQ5 300 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 OR2D3Q8NGH3 330 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 OR4A16Q8NH70 328 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 COQ8AQ8NI60 647 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 GPR146Q96CH1 333 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 KAAG1Q9UBP8 84 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SHPKQ9UHJ6 478 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 RCL1Q9Y2P8 373 aaKnown RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 STRAPQ9Y3F4 350 aaKnown RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 NACAE9PAV3 2078 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 NAP1L6A6NFF2 107 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 ZNF207O43670 478 aaKnown RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 CHST1O43916 411 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 YPEL1O60688 119 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 CA11O75493 328 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SNAPC5O75971 98 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 PPBPP02775 128 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 HSPB1P04792 205 aaKnown RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 CTSDP07339 412 aaPredicted RBP2.55□□□□□ -2
ZNF540-207ENST00000589285 SULT1A3P0DMM9 295 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SULT1A4P0DMN0 295 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 CGB3P0DN86 165 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 CGB7P0DN87 165 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 AREGP15514 252 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 C4BPBP20851 252 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 S100A11P31949 105 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 OR2F1Q13607 317 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 OPCMLQ14982 345 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 FAM74A1Q5RGS3 127 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 LEMD1Q68G75 181 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 MMD2Q8IY49 270 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 ZNF439Q8NDP4 499 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SPATA3Q8NHX4 192 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 ACY3Q96HD9 319 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 YPEL2Q96QA6 119 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 NABP2Q9BQ15 211 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 COMMD5Q9GZQ3 224 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 ARL6Q9H0F7 186 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 TMEM222Q9H0R3 208 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 SIRPDQ9H106 197 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 PIPOXQ9P0Z9 390 aa2.55□□□□□ -2
ZNF540-207ENST00000589285 IGHV1-69DA0A0B4J2H0 117 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 IGHV3-66A0A0C4DH42 116 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 A0A1B0GV72 72 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 HELTA6NFD8 242 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 CRYM-AS1A6NIL9 109 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 H0YJW9 148 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms