RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 OR4F5Q8NH21 305 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 FAM213BQ8TBF2 198 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 RNF141Q8WVD5 230 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 DOK5Q9P104 306 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 RNF114Q9Y508 228 aa8.73□□□□□ -1.01
VMP1-207ENST00000588131 IGHV3-35A0A0C4DH35 117 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 CLPSL1A2RUU4 121 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 ZNF705EA8MWA4 302 aaPredicted RBP8.72□□□□□ -1.01
VMP1-207ENST00000588131 LCE2BO14633 110 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 NUPL2O15504 423 aaKnown RBP8.72□□□□□ -1.01
VMP1-207ENST00000588131 RD3LP0DJH9 198 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 CD28P10747 220 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 M6PRP20645 277 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 ARL3P36405 182 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 PROK1P58294 105 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 SPATA31B1PQ5VZV4 182 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 FAM122CQ6P4D5 195 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 PATE2Q6UY27 113 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 Q6ZRG5 221 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 RPP25LQ8N5L8 163 aaKnown RBP8.72□□□□□ -1.01
VMP1-207ENST00000588131 C11orf44Q8N8P7 122 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 OR10G4Q8NGN3 311 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 OR10G9Q8NGN4 311 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 OR10G7Q8NGN6 311 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 TMEM37Q8WXS4 190 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 ATP6V0BQ99437 205 aa8.72□□□□□ -1.01
VMP1-207ENST00000588131 GAR1Q9NY12 217 aaKnown RBP8.72□□□□□ -1.01
VMP1-207ENST00000588131 WI2-2373I1.2A0A1W2PRP0 233 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 BMPR1BO00238 502 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 SCGB2A1O75556 95 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 MBP02144 154 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 FABP1P07148 127 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 LGALS1P09382 135 aaKnown RBP8.71□□□□□ -1.02
VMP1-207ENST00000588131 RAB5CP51148 216 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 LYZP61626 148 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 CLLU1Q5K131 121 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 SPSB3Q6PJ21 355 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 OR51G1Q8NGK1 321 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 Q8WTZ3 238 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 RCC1LQ96I51 464 aaKnown RBP8.71□□□□□ -1.02
VMP1-207ENST00000588131 UBE2E2Q96LR5 201 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 SLC25A22Q9H936 323 aa8.71□□□□□ -1.02
VMP1-207ENST00000588131 PEF1Q9UBV8 284 aaKnown RBP8.71□□□□□ -1.02
VMP1-207ENST00000588131 COX7A2P2O60397 106 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 OR2C1O95371 312 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 IL4P05112 153 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 ORM2P19652 201 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 PLP1P60201 277 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 KRTAP10-3P60369 221 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 RAB14P61106 215 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 USF2Q15853 346 aaPredicted RBP8.7□□□□□ -1.02
VMP1-207ENST00000588131 KHDC1LQ5JSQ8 128 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 PXDC1Q5TGL8 231 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 MORN5Q5VZ52 161 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 TOMM20LQ6UXN7 152 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 DPPA3Q6W0C5 159 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 ZNF600Q6ZNG1 722 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 OR1B1Q8NGR6 318 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 LRRC20Q8TCA0 184 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 RNF125Q96EQ8 232 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 SAT2Q96F10 170 aaPredicted RBP8.7□□□□□ -1.02
VMP1-207ENST00000588131 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 ZFAND3Q9H8U3 227 aa8.7□□□□□ -1.02
VMP1-207ENST00000588131 SEPSECSQ9HD40 501 aaKnown RBP8.7□□□□□ -1.02
VMP1-207ENST00000588131 PUS1Q9Y606 427 aaKnown RBP eCLIP8.7□□□□□ -1.02
VMP1-207ENST00000588131 IGHV4OR15-8A0A075B7B6 117 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 IGHV3OR16-8A0A075B7F1 116 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 A0A087WW49 117 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 CTXND1A0A1B0GTU2 59 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 A0A1B0GV50 99 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 SEC14L6B5MCN3 397 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 TEX46H3BTG2 121 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 I3L521 148 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
VMP1-207ENST00000588131 HYPMO75409 117 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 OR5G3P0C626 314 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 CDX1P47902 265 aaPredicted RBP8.69□□□□□ -1.02
VMP1-207ENST00000588131 CDC34P49427 236 aaPredicted RBP8.69□□□□□ -1.02
VMP1-207ENST00000588131 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 C10orf113Q5VZT2 155 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 LCN15Q6UWW0 184 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 MIR17HGQ75NE6 70 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 OR1L4Q8NGR5 311 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 RAB24Q969Q5 203 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 UHRF2Q96PU4 802 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 CITED2Q99967 270 aaPredicted RBP8.69□□□□□ -1.02
VMP1-207ENST00000588131 ACTR3CQ9C0K3 210 aaPredicted RBP8.69□□□□□ -1.02
VMP1-207ENST00000588131 DNAJC4Q9NNZ3 241 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 MRPL27Q9P0M9 148 aaKnown RBP8.69□□□□□ -1.02
VMP1-207ENST00000588131 FUT9Q9Y231 359 aa8.69□□□□□ -1.02
VMP1-207ENST00000588131 TRAV5A0A0B4J249 113 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 A0A1W2PPV4 95 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 MAP1LC3B2A6NCE7 125 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 GGCTO75223 188 aaKnown RBP8.68□□□□□ -1.02
VMP1-207ENST00000588131 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 FGF8P55075 233 aaPredicted RBP8.68□□□□□ -1.02
VMP1-207ENST00000588131 RHOBP62745 196 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 BLOC1S1P78537 153 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 RELQ04864 619 aaPredicted RBP8.68□□□□□ -1.02
VMP1-207ENST00000588131 DEFB136Q30KP8 78 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms