RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 TIGITQ495A1 244 aa13.3□□□□□ -0.28
NFIX-209ENST00000587760 PATE2Q6UY27 113 aa13.3□□□□□ -0.28
NFIX-209ENST00000587760 KRTAP1-3Q8IUG1 177 aa13.3□□□□□ -0.28
NFIX-209ENST00000587760 FAM167A-AS1Q96KT0 104 aa13.3□□□□□ -0.28
NFIX-209ENST00000587760 PAXXQ9BUH6 204 aa13.3□□□□□ -0.28
NFIX-209ENST00000587760 SLC25A2Q9BXI2 301 aa13.3□□□□□ -0.28
NFIX-209ENST00000587760 ZNF580Q9UK33 172 aa13.3□□□□□ -0.28
NFIX-209ENST00000587760 NAV2Q8IVL1 2488 aa13.3□□□□□ -0.28
NFIX-209ENST00000587760 NDUFB8O95169 186 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 IGHG2P01859 326 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 AMY1AP04745 511 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 LYZP61626 148 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 TCEAL7Q9BRU2 100 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 PARLQ9H300 379 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 SDF2L1Q9HCN8 221 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 FAM223BA6NKX1 122 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 OR2C1O95371 312 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 ATP5G3P48201 142 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 LY6EQ16553 131 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 FAM223AQ8IWN6 122 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.29□□□□□ -0.28
NFIX-209ENST00000587760 MAPK1IP1LQ8NDC0 245 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 C11orf52Q96A22 123 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 RPUSD4Q96CM3 377 aaKnown RBP13.29□□□□□ -0.28
NFIX-209ENST00000587760 ZNF503Q96F45 646 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 FOXC2Q99958 501 aa13.29□□□□□ -0.28
NFIX-209ENST00000587760 TRBV7-1A0A0A6YYK4 115 aa13.28□□□□□ -0.28
NFIX-209ENST00000587760 AP4M1O00189 453 aa13.28□□□□□ -0.28
NFIX-209ENST00000587760 NUPL2O15504 423 aaKnown RBP13.28□□□□□ -0.28
NFIX-209ENST00000587760 RHOGP84095 191 aa13.28□□□□□ -0.28
NFIX-209ENST00000587760 C19orf54Q5BKX5 351 aa13.28□□□□□ -0.28
NFIX-209ENST00000587760 EEF1AKMT3Q96AZ1 226 aa13.28□□□□□ -0.28
NFIX-209ENST00000587760 MRPL27Q9P0M9 148 aaKnown RBP13.28□□□□□ -0.28
NFIX-209ENST00000587760 YTHDF2Q9Y5A9 579 aaKnown RBP13.28□□□□□ -0.28
NFIX-209ENST00000587760 PRRC2AP48634 2157 aaKnown RBP13.28□□□□□ -0.28
NFIX-209ENST00000587760 DOPEY2Q9Y3R5 2298 aa13.27□□□□□ -0.28
NFIX-209ENST00000587760 ZNF674Q2M3X9 581 aa13.27□□□□□ -0.29
NFIX-209ENST00000587760 DEFB112Q30KQ8 113 aa13.27□□□□□ -0.29
NFIX-209ENST00000587760 C15orf32Q32M92 178 aa13.27□□□□□ -0.29
NFIX-209ENST00000587760 C9orf152Q5JTZ5 239 aa13.27□□□□□ -0.29
NFIX-209ENST00000587760 RNF125Q96EQ8 232 aa13.27□□□□□ -0.29
NFIX-209ENST00000587760 C20orf24Q9BUV8 137 aa13.27□□□□□ -0.29
NFIX-209ENST00000587760 CTDSP1Q9GZU7 261 aa13.27□□□□□ -0.29
NFIX-209ENST00000587760 GSX1Q9H4S2 264 aaPredicted RBP13.27□□□□□ -0.29
NFIX-209ENST00000587760 TMEM14CQ9P0S9 112 aa13.27□□□□□ -0.29
NFIX-209ENST00000587760 WI2-2373I1.2A0A1W2PRP0 233 aa13.26□□□□□ -0.29
NFIX-209ENST00000587760 CXorf65A6NEN9 183 aa13.26□□□□□ -0.29
NFIX-209ENST00000587760 TMEM88Q6PEY1 159 aa13.26□□□□□ -0.29
NFIX-209ENST00000587760 C15orf54Q8N8G6 183 aa13.26□□□□□ -0.29
NFIX-209ENST00000587760 ZNF502Q8TBZ5 544 aa13.26□□□□□ -0.29
NFIX-209ENST00000587760 SLC25A39Q9BZJ4 359 aaPredicted RBP13.26□□□□□ -0.29
NFIX-209ENST00000587760 TMEM242Q9NWH2 141 aa13.26□□□□□ -0.29
NFIX-209ENST00000587760 CR1P17927 2039 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 IL4P05112 153 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 OR10J4P0C629 311 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 IER3P46695 156 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 ATP5G2Q06055 141 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 CBLN2Q8IUK8 224 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 ZNF491Q8N8L2 437 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 SHANK2-AS3Q9BTD1 123 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 PRDM13Q9H4Q3 707 aa13.25□□□□□ -0.29
NFIX-209ENST00000587760 UTP20O75691 2785 aaKnown RBP13.25□□□□□ -0.29
NFIX-209ENST00000587760 TRAV5A0A0B4J249 113 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 F8W735 103 aaPredicted RBP13.24□□□□□ -0.29
NFIX-209ENST00000587760 G3V318 75 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 TSPAN4O14817 238 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 NDUFB4O95168 129 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 MT-ND4LP03901 98 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 MORN5Q5VZ52 161 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 ZNF600Q6ZNG1 722 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 BPIFA4PQ86YQ2 179 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 USMG5Q96IX5 58 aa13.24□□□□□ -0.29
NFIX-209ENST00000587760 LINC01548A6NM66 108 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 H3BRN7 92 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 CTSGP08311 255 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 NBEAP1P0C6P0 100 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 RAB9AP51151 201 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 KIAA0141Q14154 515 aaPredicted RBP13.23□□□□□ -0.29
NFIX-209ENST00000587760 Q6YL49 198 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 FXYD5Q96DB9 178 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 VPREB3Q9UKI3 123 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 SOX21Q9Y651 276 aaPredicted RBP13.23□□□□□ -0.29
NFIX-209ENST00000587760 LY96Q9Y6Y9 160 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 SCO2A0A1W2PP80 73 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 OR2T8A6NH00 312 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 SH2D7A6NKC9 451 aaPredicted RBP13.23□□□□□ -0.29
NFIX-209ENST00000587760 C9JCJ5 164 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 BMPR1BO00238 502 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 TACC2O95359 2948 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 SUMO1P63165 101 aaKnown RBP13.23□□□□□ -0.29
NFIX-209ENST00000587760 ADIRFQ15847 76 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 FAM209BQ5JX69 171 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 BCL6BQ8N143 479 aaPredicted RBP13.23□□□□□ -0.29
NFIX-209ENST00000587760 OR4F17Q8NGA8 305 aa13.23□□□□□ -0.29
NFIX-209ENST00000587760 POLQO75417 2590 aa13.22□□□□□ -0.29
NFIX-209ENST00000587760 IGHV4-59P01825 116 aa13.22□□□□□ -0.29
NFIX-209ENST00000587760 TRGV3P03979 118 aa13.22□□□□□ -0.29
NFIX-209ENST00000587760 PYYP10082 97 aa13.22□□□□□ -0.29
NFIX-209ENST00000587760 HIST1H1EP10412 219 aaKnown RBP13.22□□□□□ -0.29
NFIX-209ENST00000587760 GP9P14770 177 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms