RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 SMCO1Q147U7 214 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 RBMY1FQ15415 496 aaKnown RBP8.46□□□□□ -1.06
LIG3-207ENST00000586119 MLANAQ16655 118 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 OR1P1Q8NH06 330 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 C2CD4CQ8TF44 421 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 GATAD1Q8WUU5 269 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 ATP6V0BQ99437 205 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 SEC22CQ9BRL7 303 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 PDCD10Q9BUL8 212 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 MS4A6AQ9H2W1 248 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
LIG3-207ENST00000586119 INS-IGF2F8WCM5 200 aa8.45□□□□□ -1.06
LIG3-207ENST00000586119 PRCDQ00LT1 54 aa8.45□□□□□ -1.06
LIG3-207ENST00000586119 RELQ04864 619 aaPredicted RBP8.45□□□□□ -1.06
LIG3-207ENST00000586119 GGNBP1Q5YKI7 109 aa8.45□□□□□ -1.06
LIG3-207ENST00000586119 Q6ZRM9 215 aa8.45□□□□□ -1.06
LIG3-207ENST00000586119 C11orf68Q9H3H3 251 aaKnown RBP8.45□□□□□ -1.06
LIG3-207ENST00000586119 MRPL36Q9P0J6 103 aaKnown RBP8.45□□□□□ -1.06
LIG3-207ENST00000586119 CACNG5Q9UF02 275 aa8.45□□□□□ -1.06
LIG3-207ENST00000586119 C7orf66A4D0T2 115 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 FAM90A26D6RGX4 464 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 ST8SIA3O43173 380 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 GNG7O60262 68 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 PITX3O75364 302 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 IFNA17P01571 189 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 HOXB5P09067 269 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 CMC4P56277 68 aaPredicted RBP8.44□□□□□ -1.06
LIG3-207ENST00000586119 SPCS3P61009 180 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 NDUFA5Q16718 116 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 Q8NAQ8 132 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 TXN2Q99757 166 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 MFFQ9GZY8 342 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 VSIRQ9H7M9 311 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 ZFAND3Q9H8U3 227 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 RYR1P21817 5038 aa8.44□□□□□ -1.06
LIG3-207ENST00000586119 ELOA3CA0A087WX78 387 aaPredicted RBP8.43□□□□□ -1.06
LIG3-207ENST00000586119 IGHV4-28A0A0C4DH34 117 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 KNCNA6PVL3 124 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 DNASE2O00115 360 aaPredicted RBP8.43□□□□□ -1.06
LIG3-207ENST00000586119 ADAP1O75689 374 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 TMEM50AO95807 157 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 EIF2B2P49770 351 aaKnown RBP8.43□□□□□ -1.06
LIG3-207ENST00000586119 RPL11P62913 178 aaKnown RBP8.43□□□□□ -1.06
LIG3-207ENST00000586119 PAFAH1B2P68402 229 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 ERHP84090 104 aaKnown RBP8.43□□□□□ -1.06
LIG3-207ENST00000586119 ZNF767PQ75MW2 155 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 OR1S1Q8NH92 325 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 SCRT1Q9BWW7 348 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 ENY2Q9NPA8 101 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 CLEC5AQ9NY25 188 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 HSPB7Q9UBY9 170 aa8.43□□□□□ -1.06
LIG3-207ENST00000586119 PUS1Q9Y606 427 aaKnown RBP eCLIP8.43□□□□□ -1.06
LIG3-207ENST00000586119 MUC4Q99102 2169 aa8.42□□□□□ -1.06
LIG3-207ENST00000586119 MED6O75586 246 aa8.42□□□□□ -1.06
LIG3-207ENST00000586119 C4BPBP20851 252 aa8.42□□□□□ -1.06
LIG3-207ENST00000586119 HLA-DMBP28068 263 aa8.42□□□□□ -1.06
LIG3-207ENST00000586119 Q6ZTC4 211 aa8.42□□□□□ -1.06
LIG3-207ENST00000586119 ZNF114Q8NC26 417 aa8.42□□□□□ -1.06
LIG3-207ENST00000586119 RABAC1Q9UI14 185 aa8.42□□□□□ -1.06
LIG3-207ENST00000586119 X6R8D5 127 aa8.42□□□□□ -1.06
LIG3-207ENST00000586119 SSNA1O43805 119 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 HOXA1P49639 335 aaPredicted RBP8.41□□□□□ -1.06
LIG3-207ENST00000586119 SUB1P53999 127 aaKnown RBP eCLIP8.41□□□□□ -1.06
LIG3-207ENST00000586119 ATP5IP56385 69 aaPredicted RBP8.41□□□□□ -1.06
LIG3-207ENST00000586119 ID3Q02535 119 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 IAH1Q2TAA2 248 aaPredicted RBP8.41□□□□□ -1.06
LIG3-207ENST00000586119 GSG1LQ6UXU4 331 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 ZNF600Q6ZNG1 722 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
LIG3-207ENST00000586119 NOXA1Q86UR1 476 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 STHQ8IWL8 128 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 OR4D5Q8NGN0 318 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 C2orf50Q96LR7 162 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 FNDC4Q9H6D8 234 aaPredicted RBP8.41□□□□□ -1.06
LIG3-207ENST00000586119 CELA1Q9UNI1 258 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 ALG5Q9Y673 324 aa8.41□□□□□ -1.06
LIG3-207ENST00000586119 C5orf51A6NDU8 294 aa8.4□□□□□ -1.06
LIG3-207ENST00000586119 CEBPZOSA8MTT3 80 aa8.4□□□□□ -1.06
LIG3-207ENST00000586119 K7EQG2 157 aa8.4□□□□□ -1.06
LIG3-207ENST00000586119 ZNF688P0C7X2 276 aa8.4□□□□□ -1.06
LIG3-207ENST00000586119 NKX2-1P43699 371 aaPredicted RBP8.4□□□□□ -1.06
LIG3-207ENST00000586119 CYCSP99999 105 aaKnown RBP8.4□□□□□ -1.06
LIG3-207ENST00000586119 AKAP14Q86UN6 197 aa8.4□□□□□ -1.06
LIG3-207ENST00000586119 STXBP6Q8NFX7 210 aa8.4□□□□□ -1.06
LIG3-207ENST00000586119 CIB3Q96Q77 187 aaPredicted RBP8.4□□□□□ -1.06
LIG3-207ENST00000586119 GINS3Q9BRX5 216 aa8.4□□□□□ -1.06
LIG3-207ENST00000586119 PKHD1P08F94 4074 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 IGHV4-4A0A075B6R2 117 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 CORTO00230 105 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 SYNGR2O43760 224 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 RNASE2P10153 161 aaKnown RBP8.39□□□□□ -1.07
LIG3-207ENST00000586119 S100A1P23297 94 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 NPPCP23582 126 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 SNCAP37840 140 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 HTR2BP41595 481 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 NPBWR1P48145 328 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 RPP30P78346 268 aaKnown RBP8.39□□□□□ -1.07
LIG3-207ENST00000586119 BSXQ3C1V8 233 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms