RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 GAR1Q9NY12 217 aaKnown RBP8.18□□□□□ -1.1
LIG3-203ENST00000585370 RNF24Q9Y225 148 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 DMRT1Q9Y5R6 373 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 IGHV3OR16-10A0A075B7F0 116 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 PSMB11A5LHX3 300 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
LIG3-203ENST00000585370 TCF21O43680 179 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 HYPMO75409 117 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 ARL14EPLP0DKL9 152 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 APELAP0DMC3 54 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 S100A7P31151 101 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 FCGR2BP31994 310 aaPredicted RBP8.17□□□□□ -1.1
LIG3-203ENST00000585370 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
LIG3-203ENST00000585370 YPEL3P61236 119 aaPredicted RBP8.17□□□□□ -1.1
LIG3-203ENST00000585370 PNRC1Q12796 327 aaPredicted RBP8.17□□□□□ -1.1
LIG3-203ENST00000585370 GUCA2BQ16661 112 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 ASPHD1Q5U4P2 390 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 UNQ5815/PRO19632Q6UWF5 114 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 C9orf139Q6ZV77 190 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 OR5R1Q8NH85 324 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 TMEM190Q8WZ59 177 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 ATP6V0BQ99437 205 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 NIPSNAP3BQ9BS92 247 aa8.17□□□□□ -1.1
LIG3-203ENST00000585370 FAM103A1Q9BTL3 118 aaKnown RBP8.17□□□□□ -1.1
LIG3-203ENST00000585370 SEPSECSQ9HD40 501 aaKnown RBP8.17□□□□□ -1.1
LIG3-203ENST00000585370 TRRAPQ9Y4A5 3859 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 B4DEV8 164 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 PAGE4O60829 102 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 BRI3O95415 125 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 AVPP01185 164 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 IGLC1P0CG04 106 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 NDPQ00604 133 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 ZNF90Q03938 601 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 RHEBQ15382 184 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 FBLN7Q53RD9 439 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 MIR17HGQ75NE6 70 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 CYB561D1Q8N8Q1 229 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 OR51G1Q8NGK1 321 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 TMEM37Q8WXS4 190 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 TVP23CQ96ET8 276 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 UHRF2Q96PU4 802 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 TMPRSS5Q9H3S3 457 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 C21orf62Q9NYP8 219 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 MRPL36Q9P0J6 103 aaKnown RBP8.16□□□□□ -1.1
LIG3-203ENST00000585370 ZNF580Q9UK33 172 aa8.16□□□□□ -1.1
LIG3-203ENST00000585370 MGAM2Q2M2H8 2515 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 PLXNB1O43157 2135 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 C11orf94C9JXX5 98 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 H3BUA1 57 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 H3BUX3 64 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 TOMM40O96008 361 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 FSHBP01225 129 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 IGF1P05019 195 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 RD3LP0DJH9 198 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 GATA2P23769 480 aaPredicted RBP8.15□□□□□ -1.1
LIG3-203ENST00000585370 CD81P60033 236 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 BTN1A1Q13410 526 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 ATRAIDQ6UW56 229 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 NECAP1Q8NC96 275 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 OR5T1Q8NG75 326 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 OR4F5Q8NH21 305 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 OR4F4Q96R69 305 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 HSPB9Q9BQS6 159 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 FBXL7Q9UJT9 491 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 PRELID1Q9Y255 219 aa8.15□□□□□ -1.1
LIG3-203ENST00000585370 PKD1L1Q8TDX9 2849 aa8.15□□□□□ -1.11
LIG3-203ENST00000585370 TRBV9A0A0B4J1U6 114 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 A0A1W2PRE2 83 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 H3BQ15 152 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 M0R036 132 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 ATP6V0E1O15342 81 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 GNG7O60262 68 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 SCO1O75880 301 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 IGHV3-48P01763 117 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 IGHG2P01859 326 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 PSG1P11464 419 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 SPATA31B1PQ5VZV4 182 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 CST9LP1Q5W188 147 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 FAM90A2PQ658T7 463 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 PATE2Q6UY27 113 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.14□□□□□ -1.11
LIG3-203ENST00000585370 Q8WTZ3 238 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 TCEAL7Q9BRU2 100 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 TUBA4BQ9H853 241 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 SMCO4Q9NRQ5 59 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 HIGD1AQ9Y241 93 aa8.14□□□□□ -1.11
LIG3-203ENST00000585370 PUS1Q9Y606 427 aaKnown RBP eCLIP8.14□□□□□ -1.11
LIG3-203ENST00000585370 A0A087WWC5 75 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 TRBV7-1A0A0A6YYK4 115 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 IGHV3-21A0A0B4J1V1 117 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 TRAV41A0A0B4J266 112 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 C7orf77A4D0Y5 90 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 FAM223BA6NKX1 122 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 FAM74A7A6NL05 159 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 ZNF727A8MUV8 499 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 OR7C2O60412 319 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 NDUFB8O95169 186 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 IGKV1-17P01599 117 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms