RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 OR5AU1Q8NGC0 362 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 UBE2E2Q96LR5 201 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 SLC25A32Q9H2D1 315 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 RNF114Q9Y508 228 aa7.62□□□□□ -1.19
SMCHD1-212ENST00000585229 ZFP92A6NM28 416 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 SCGB2A1O75556 95 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 TOMM40O96008 361 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 FABP1P07148 127 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 CTSGP08311 255 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 LGALS1P09382 135 aaKnown RBP7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 CDX1P47902 265 aaPredicted RBP7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 SULT1A2P50226 295 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 B2MP61769 119 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 SRSF2Q01130 221 aaKnown RBP7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 TIGITQ495A1 244 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 Q56UQ5 140 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 STPG3Q8N7X2 389 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF709Q8N972 641 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 OR4X2Q8NGF9 303 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 TMED6Q8WW62 240 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 GNB4Q9HAV0 340 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 RFNGQ9Y644 331 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 PXMP4Q9Y6I8 212 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 S4R3C0 116 aa7.61□□□□□ -1.19
SMCHD1-212ENST00000585229 JMJD1CQ15652 2540 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 OR2T8A6NH00 312 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 UMAD1C9J7I0 102 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 I3L521 148 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 YIF1AO95070 293 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 OR2C1O95371 312 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 TSPAN15O95858 294 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 IFNA7P01567 189 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 IGHV3-23P01764 117 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 MBP02144 154 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 CLEC3BP05452 202 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 GPR183P32249 361 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 RAB5CP51148 216 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF90Q03938 601 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 FOXL1Q12952 345 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 KIR3DS1Q14943 382 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 PXDC1Q5TGL8 231 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 MIC13Q5XKP0 118 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF600Q6ZNG1 722 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 TMEM182Q6ZP80 229 aaPredicted RBP7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF767PQ75MW2 155 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 PRIMA1Q86XR5 153 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 CLUHP3Q96NS8 147 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 CHRDL1Q9BU40 450 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 SLC39A9Q9NUM3 307 aa7.6□□□□□ -1.19
SMCHD1-212ENST00000585229 WI2-2373I1.2A0A1W2PRP0 233 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 SEC14L6B5MCN3 397 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 BMPR1BO00238 502 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 NUPL2O15504 423 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 IGHV3-11P01762 117 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 PSG1P11464 419 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 M6PRP20645 277 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 ARL3P36405 182 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 ZNF616Q08AN1 781 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 C21orf62-AS1Q17RA5 79 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 TMEM41BQ5BJD5 291 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 FFAR4Q5NUL3 377 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 ALKAL2Q6UX46 152 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 CLEC19AQ6UXS0 136 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 DPPA3Q6W0C5 159 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 BPIFCQ8NFQ6 507 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 OR51G1Q8NGK1 321 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 C4orf3Q8WVX3 66 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 PEF1Q9UBV8 284 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 UBQLN2Q9UHD9 624 aa7.59□□□□□ -1.19
SMCHD1-212ENST00000585229 SETD2Q9BYW2 2564 aaPredicted RBP7.59□□□□□ -1.2
SMCHD1-212ENST00000585229 TRBV12-3P01733 135 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 OR5G3P0C626 314 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 RD3LP0DJH9 198 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 CD28P10747 220 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 GATA2P23769 480 aaPredicted RBP7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 KRTAP10-3P60369 221 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 RELQ04864 619 aaPredicted RBP7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 ACOT6Q3I5F7 207 aaPredicted RBP7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 AKR1C8PQ5T2L2 129 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 LRRC20Q8TCA0 184 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 C19orf24Q9BVV8 132 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 VSIRQ9H7M9 311 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 RPRMQ9NS64 109 aa7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 MRPL27Q9P0M9 148 aaKnown RBP7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 TSSC4Q9Y5U2 329 aaPredicted RBP7.58□□□□□ -1.2
SMCHD1-212ENST00000585229 PPP5D1E7EU14 171 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 NDUFA4O00483 81 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 GGCTO75223 188 aaKnown RBP7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 ELLP55199 621 aaPredicted RBP7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 RAB2AP61019 212 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 KRTAP24-1Q3LI83 254 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 FAM74A1Q5RGS3 127 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 PATE2Q6UY27 113 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 Q6ZRG5 221 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 GPHB5Q86YW7 130 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 RPP25LQ8N5L8 163 aaKnown RBP7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 OR1L4Q8NGR5 311 aa7.57□□□□□ -1.2
SMCHD1-212ENST00000585229 Q8WTZ3 238 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms