RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CDX1P47902 265 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 CFHR3Q02985 330 aa10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 RAB31Q13636 194 aa10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 SOHLH1Q5JUK2 328 aa10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 TMEM116Q8NCL8 245 aa10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 OR2G3Q8NGZ4 309 aa10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 MGST2Q99735 147 aa10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 C20orf24Q9BUV8 137 aa10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 S4R3C0 116 aa10.81□□□□□ -0.68
CDK5RAP3-219ENST00000580670 IGKV1OR2-108A0A075B7D4 117 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 CXorf65A6NEN9 183 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 H3BUA1 57 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 TRGV3P03979 118 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 RAB2AP61019 212 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 RPL15P61313 204 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 C15orf32Q32M92 178 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 DNLZQ5SXM8 178 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 SPSB3Q6PJ21 355 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 ZNF329Q86UD4 541 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 NECAP1Q8NC96 275 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 PSMG3Q9BT73 122 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 TIMM9Q9Y5J7 89 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 RBFOX3A6NFN3 312 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 C17orf112F2Z3M2 114 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 TPPP2P59282 170 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 TMEM182Q6ZP80 229 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 Q6ZSV7 163 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 THAP8Q8NA92 274 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 OR4X1Q8NH49 305 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 GGTLC1Q9BX51 225 aa10.8□□□□□ -0.68
CDK5RAP3-219ENST00000580670 FAM223BA6NKX1 122 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 ZFP92A6NM28 416 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 TCF21O43680 179 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 BRI3O95415 125 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 IGLV1-40P01703 118 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 IGHV3-23P01764 117 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 PF4V1P10720 104 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 OR10J1P30954 320 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 MFAP4P55083 255 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 CENPVQ7Z7K6 275 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 FAM223AQ8IWN6 122 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 VN1R17PQ8TDU5 208 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 SERTAD4Q9NUC0 356 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
CDK5RAP3-219ENST00000580670 IGKV1D-37A0A075B6S9 117 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 PSMB11A5LHX3 300 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 IGHG4P01861 327 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 SRP19P09132 144 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 ELLP55199 621 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 SLC35B1P78383 322 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 SERF2P84101 59 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 ATP5G2Q06055 141 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 KIAA0141Q14154 515 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 Q56UQ5 140 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 FAM213BQ8TBF2 198 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
CDK5RAP3-219ENST00000580670 IFITM10A6NMD0 228 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 HSPB1P04792 205 aaKnown RBP10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 FFAR4Q5NUL3 377 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 AKR1C8PQ5T2L2 129 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 MIC13Q5XKP0 118 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 C10orf99Q6UWK7 81 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 DPPA3Q6W0C5 159 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 ZNF600Q6ZNG1 722 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 CYP2G1PQ6ZSU1 146 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 TRGV9Q99603 122 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 RARRES2Q99969 163 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 KCNIP2Q9NS61 270 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 SLC45A2Q9UMX9 530 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 PUS1Q9Y606 427 aaKnown RBP eCLIP10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 PXMP4Q9Y6I8 212 aa10.77□□□□□ -0.68
CDK5RAP3-219ENST00000580670 NF1P21359 2839 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TCRBV4S1A1TA0A5B7 111 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 H3BQ15 152 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 GNG7O60262 68 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RPL29P47914 159 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RAB9AP51151 201 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CD81P60033 236 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CCL20P78556 96 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ZNF506Q5JVG8 444 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 LCNL1Q6ZST4 164 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 STPG3Q8N7X2 389 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 OR10G4Q8NGN3 311 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ZNF502Q8TBZ5 544 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 EEF1AKMT3Q96AZ1 226 aa10.77□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TMEM89A2RUT3 159 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 SEC14L6B5MCN3 397 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 F8W735 103 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 IGLC1P0CG04 106 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 GATA2P23769 480 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PSMB8P28062 276 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ZNF90Q03938 601 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ELOBQ15370 118 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TEX38Q6PEX7 206 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 USMG5Q96IX5 58 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TXN2Q99757 166 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 SLC39A9Q9NUM3 307 aa10.76□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TRAV30A0A087WSZ9 112 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TRBV7-1A0A0A6YYK4 115 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TRAV1-1A0A0B4J248 108 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms