RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PRO1933Q9H354 126 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 Q9H3A6 140 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 OTORQ9NRC9 128 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NAT8BQ9UHF3 227 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TP53TG3Q9ULZ0 132 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 HILPDAQ9Y5L2 63 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MINOS1-NBL1R4GNA1 71 aa7.41□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MUC3AQ02505 3323 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TNCP24821 2201 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 A6NNC1 897 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NPIPB5A8MRT5 1133 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 H3BRN7 92 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SERF1AO75920 110 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 HIST1H1EP10412 219 aaKnown RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PAX1P15863 534 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 HOXB4P17483 251 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 LINC00310P59036 64 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RAB4BP61018 213 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 DEFA6Q01524 100 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MRPL54Q6P161 138 aaKnown RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 REC114Q7Z4M0 266 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 VMO1Q7Z5L0 202 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 BAGE3Q86Y29 109 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 WIPF2Q8TF74 440 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TMEM68Q96MH6 324 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 NOL4LQ96MY1 436 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GPR82Q96P67 336 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MS4A10Q96PG2 267 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RBM14Q96PK6 669 aaKnown RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SLC25A39Q9BZJ4 359 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ZNF331Q9NQX6 463 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MRPL27Q9P0M9 148 aaKnown RBP7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ZNF492Q9P255 531 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RPH3ALQ9UNE2 315 aa7.4□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ZNF292O60281 2723 aa7.4□□□□□ -1.23
CDK5RAP3-208ENST00000578525 TRAV30A0A087WSZ9 112 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 TRBV6-1A0A0K0K1D8 114 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 A0A1W2PRD5 423 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 A0A1W2PRF3 423 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 A0A1W2PRM7 423 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 SPINK4O60575 86 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 IGKV1-17P01599 117 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 TCRAP04437 139 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 SNRPCP09234 159 aaKnown RBP7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 DDTP30046 118 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 EBI3Q14213 229 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 HES1Q14469 280 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 OR10J3Q5JRS4 329 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 LEMD1Q68G75 181 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 ZNF600Q6ZNG1 722 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 Q8N6K4 173 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 TSKUQ8WUA8 353 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 ARPC1AQ92747 370 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 ZNF48Q96MX3 618 aaPredicted RBP7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 SHANK2-AS3Q9BTD1 123 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 SIRPDQ9H106 197 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 PRORYQ9H606 182 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 RNF24Q9Y225 148 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 APC2O95996 2303 aa7.39□□□□□ -1.23
CDK5RAP3-208ENST00000578525 MUC6Q6W4X9 2439 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 GVINP1Q7Z2Y8 2422 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 IGLV11-55A0A075B6I3 123 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 WI2-2373I1.2A0A1W2PRP0 233 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 H3BTX0 84 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 BMPR1BO00238 502 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 SCGB1D1O95968 90 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 CA1P00915 261 aaPredicted RBP7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 LTAP01374 205 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 APCSP02743 223 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 CDKN1AP38936 164 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 SLC35B1P78383 322 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 CT83Q5H943 113 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 ASPHD1Q5U4P2 390 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 PRR27Q6MZM9 219 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 S100A7AQ86SG5 101 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 Q86TA4 180 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 ZNF664Q8N3J9 261 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 OR4F17Q8NGA8 305 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 FAM168AQ92567 244 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 MLST8Q9BVC4 326 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 RPP21Q9H633 154 aaKnown RBP7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 UBTD1Q9HAC8 227 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 GNB4Q9HAV0 340 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 ZNF586Q9NXT0 402 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 NAGKQ9UJ70 344 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 TBL2Q9Y4P3 447 aaKnown RBP7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 AKAP13Q12802 2813 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 CEP250Q9BV73 2442 aa7.38□□□□□ -1.23
CDK5RAP3-208ENST00000578525 ZFHX2Q9C0A1 2572 aaPredicted RBP7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 IGHV2-70DA0A0C4DH43 119 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 A0A1W2PPR1 153 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 C19orf71A6NCJ1 209 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 F2Z2F3 143 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 HLA-DRB1P01911 266 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 TMEM11P17152 192 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 CD24P25063 80 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 ZFP36P26651 326 aaKnown RBP7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 BRS3P32247 399 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 EFNA4P52798 201 aa7.37□□□□□ -1.23
CDK5RAP3-208ENST00000578525 MFAP4P55083 255 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms