RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 C21orf62Q9NYP8 219 aa7.8□□□□□ -1.16
CRLF3-202ENST00000577725 DOK5Q9P104 306 aa7.8□□□□□ -1.16
CRLF3-202ENST00000577725 TCRBV4S1A1TA0A5B7 111 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 OR2T8A6NH00 312 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 HMGB3O15347 200 aaKnown RBP7.79□□□□□ -1.16
CRLF3-202ENST00000577725 CLN5O75503 358 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 TSPAN15O95858 294 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 IGLC1P0CG04 106 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 GPR183P32249 361 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 ATP5G2Q06055 141 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 ZNF726P1Q15940 193 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 KLK9Q2XQG4 91 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 ACOT6Q3I5F7 207 aaPredicted RBP7.79□□□□□ -1.16
CRLF3-202ENST00000577725 PXDC1Q5TGL8 231 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 CLEC19AQ6UXS0 136 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 Q8N2B8 174 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 NECAP1Q8NC96 275 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 OR10G4Q8NGN3 311 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 OR10G9Q8NGN4 311 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 OR10G7Q8NGN6 311 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 ZNF502Q8TBZ5 544 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 EEF1AKMT3Q96AZ1 226 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 TRGV9Q99603 122 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 HRH4Q9H3N8 390 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 SERTAD4Q9NUC0 356 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 THYN1Q9P016 225 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 KLK9Q9UKQ9 250 aa7.79□□□□□ -1.16
CRLF3-202ENST00000577725 IGHV3-35A0A0C4DH35 117 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 PSMB11A5LHX3 300 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 CLDN34H7C241 214 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 GNG7O60262 68 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 IGKV1-17P01599 117 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 IGLV1-40P01703 118 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 TRBV12-3P01733 135 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 RPL29P47914 159 aaKnown RBP7.78□□□□□ -1.16
CRLF3-202ENST00000577725 NPBWR1P48145 328 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 FGF8P55075 233 aaPredicted RBP7.78□□□□□ -1.16
CRLF3-202ENST00000577725 SERF2P84101 59 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 PRR20EP86478 221 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 PRR20CP86479 221 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 PRR20DP86480 221 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 PRR20BP86481 221 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 PRR20AP86496 221 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 LCN15Q6UWW0 184 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 COMMD7Q86VX2 200 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 VN1R17PQ8TDU5 208 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 RCC1LQ96I51 464 aaKnown RBP7.78□□□□□ -1.16
CRLF3-202ENST00000577725 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 OR5B12Q96R08 314 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 CHRDL1Q9BU40 450 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 GNB4Q9HAV0 340 aa7.78□□□□□ -1.16
CRLF3-202ENST00000577725 IGHV3OR16-8A0A075B7F1 116 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 ANKRD34BA5PLL1 514 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 FAM223BA6NKX1 122 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 UMAD1C9J7I0 102 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 PPP5D1E7EU14 171 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 H3BUA1 57 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 TSPAN9O75954 239 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 IGHG4P01861 327 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 CRYBA1P05813 215 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 PSG1P11464 419 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 M6PRP20645 277 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 RAB5CP51148 216 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 RAB9AP51151 201 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 LYZP61626 148 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 BLOC1S1P78537 153 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 MIR17HGQ75NE6 70 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 FAM223AQ8IWN6 122 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 RPP25LQ8N5L8 163 aaKnown RBP7.77□□□□□ -1.17
CRLF3-202ENST00000577725 SAT2Q96F10 170 aaPredicted RBP7.77□□□□□ -1.17
CRLF3-202ENST00000577725 KCNIP2Q9NS61 270 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 ZNF580Q9UK33 172 aa7.77□□□□□ -1.17
CRLF3-202ENST00000577725 COL7A1Q02388 2944 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 MAP1LC3B2A6NCE7 125 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 LINC00862A6NCI5 91 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 COX7A2P2O60397 106 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 MBP02144 154 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 CLEC3BP05452 202 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 ORM2P19652 201 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 PSMB8P28062 276 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 ADMP35318 185 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 CDC34P49427 236 aaPredicted RBP7.76□□□□□ -1.17
CRLF3-202ENST00000577725 SUMO1P63165 101 aaKnown RBP7.76□□□□□ -1.17
CRLF3-202ENST00000577725 CCL20P78556 96 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 SPSB3Q6PJ21 355 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 PATE2Q6UY27 113 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 DPPA3Q6W0C5 159 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 C18orf65Q6ZTR6 163 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 OR51G1Q8NGK1 321 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 OR1B1Q8NGR6 318 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 LRRC20Q8TCA0 184 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 SFT2D1Q8WV19 159 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 ZNF414Q96IQ9 312 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 PBDC1Q9BVG4 233 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 ACTR3CQ9C0K3 210 aaPredicted RBP7.76□□□□□ -1.17
CRLF3-202ENST00000577725 MAP1LC3BQ9GZQ8 125 aa7.76□□□□□ -1.17
CRLF3-202ENST00000577725 TRAV5A0A0B4J249 113 aa7.75□□□□□ -1.17
CRLF3-202ENST00000577725 CTXND1A0A1B0GTU2 59 aa7.75□□□□□ -1.17
CRLF3-202ENST00000577725 TOMM40O96008 361 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms