RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 PSMG3Q9BT73 122 aaPredicted RBP12.94□□□□□ -0.34
USP43-204ENST00000573955 CSMD1Q96PZ7 3565 aa12.94□□□□□ -0.34
USP43-204ENST00000573955 RTL8BQ17RB0 113 aa12.93□□□□□ -0.34
USP43-204ENST00000573955 GTF2H5Q6ZYL4 71 aa12.93□□□□□ -0.34
USP43-204ENST00000573955 F2Z2F3 143 aa12.93□□□□□ -0.34
USP43-204ENST00000573955 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
USP43-204ENST00000573955 C3orf79P0CE67 100 aa12.93□□□□□ -0.34
USP43-204ENST00000573955 VDAC2P45880 294 aaPredicted RBP12.93□□□□□ -0.34
USP43-204ENST00000573955 Q0VG73 95 aa12.93□□□□□ -0.34
USP43-204ENST00000573955 FOXL1Q12952 345 aa12.93□□□□□ -0.34
USP43-204ENST00000573955 SLC25A22Q9H936 323 aa12.93□□□□□ -0.34
USP43-204ENST00000573955 FAM90A9PA6NNJ1 464 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 CRYGCP07315 174 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 BVES-AS1Q5T3Y7 98 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 SSBP4Q9BWG4 385 aaPredicted RBP12.92□□□□□ -0.34
USP43-204ENST00000573955 NPCDR1Q9BY65 106 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 KAAG1Q9UBP8 84 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 VENTXO95231 258 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 NUDT3O95989 172 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 SERF2P84101 59 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 TMEM30BQ3MIR4 351 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 ZNF833PQ6ZTB9 187 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 RPP25LQ8N5L8 163 aaKnown RBP12.92□□□□□ -0.34
USP43-204ENST00000573955 DERL1Q9BUN8 251 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 MUC21A0A0G2JKD1 596 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 MUC21A0A140T8X8 626 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 SAA1P0DJI8 122 aaPredicted RBP12.92□□□□□ -0.34
USP43-204ENST00000573955 PMCHP20382 165 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 TMEM155Q4W5P6 130 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 MUC21Q5SSG8 566 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 NEGR1Q7Z3B1 354 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 HARBI1Q96MB7 349 aa12.92□□□□□ -0.34
USP43-204ENST00000573955 TRAV9-2A0A087WT02 112 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 IGHV3-72A0A0B4J1Y9 119 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 C17orf112F2Z3M2 114 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 CD5LO43866 347 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 CD1BP29016 333 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 MRPL18Q9H0U6 180 aaKnown RBP12.91□□□□□ -0.34
USP43-204ENST00000573955 TMEM14BQ9NUH8 114 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 SMIM17P0DL12 118 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 IGHV1-8P0DP01 117 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 DLX6P56179 175 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 OR52E5Q8NH55 327 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 ENY2Q9NPA8 101 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 THYN1Q9P016 225 aa12.91□□□□□ -0.34
USP43-204ENST00000573955 H0YJW9 148 aa12.9□□□□□ -0.34
USP43-204ENST00000573955 APOA2P02652 100 aa12.9□□□□□ -0.34
USP43-204ENST00000573955 CBLN1P23435 193 aa12.9□□□□□ -0.34
USP43-204ENST00000573955 HSPE1P61604 102 aaKnown RBP12.9□□□□□ -0.34
USP43-204ENST00000573955 C12orf54Q6X4T0 127 aa12.9□□□□□ -0.34
USP43-204ENST00000573955 SGMS2Q8NHU3 365 aa12.9□□□□□ -0.34
USP43-204ENST00000573955 TMEM204Q9BSN7 226 aa12.9□□□□□ -0.34
USP43-204ENST00000573955 FOXA2Q9Y261 457 aaPredicted RBP12.9□□□□□ -0.34
USP43-204ENST00000573955 ARHGAP32A7KAX9 2087 aa12.9□□□□□ -0.34
USP43-204ENST00000573955 CHD6Q8TD26 2715 aa12.9□□□□□ -0.34
USP43-204ENST00000573955 K7EQM0 130 aa12.9□□□□□ -0.35
USP43-204ENST00000573955 PLP1P60201 277 aa12.9□□□□□ -0.35
USP43-204ENST00000573955 GCSAMLQ5JQS6 135 aa12.9□□□□□ -0.35
USP43-204ENST00000573955 OR10G9Q8NGN4 311 aa12.9□□□□□ -0.35
USP43-204ENST00000573955 OR10G7Q8NGN6 311 aa12.9□□□□□ -0.35
USP43-204ENST00000573955 BORCS7Q96B45 105 aa12.9□□□□□ -0.35
USP43-204ENST00000573955 SLC39A9Q9NUM3 307 aa12.9□□□□□ -0.35
USP43-204ENST00000573955 CA2P00918 260 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 PSMB3P49720 205 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 TCTEX1D4Q5JR98 221 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 LHX4Q969G2 390 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 BBC3Q96PG8 261 aaPredicted RBP12.89□□□□□ -0.35
USP43-204ENST00000573955 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 C19orf84I3L1E1 186 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 COX7A1P24310 79 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 UFSP1Q6NVU6 142 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 ZNF841Q6ZN19 808 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 KCNS1Q96KK3 526 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 NPVFQ9HCQ7 196 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 CELSR2Q9HCU4 2923 aa12.89□□□□□ -0.35
USP43-204ENST00000573955 UPK2O00526 184 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 IGLL1P15814 213 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 NPY1RP25929 384 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 OR4F5Q8NH21 305 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 ZC2HC1AQ96GY0 325 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 RAB1BQ9H0U4 201 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 GEMIN7Q9H840 131 aaKnown RBP12.88□□□□□ -0.35
USP43-204ENST00000573955 TIMM9Q9Y5J7 89 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 ENSAO43768 121 aaKnown RBP12.88□□□□□ -0.35
USP43-204ENST00000573955 PPOXP50336 477 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 HLA-DRB5Q30154 266 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 C19orf35Q6ZS72 473 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 MTURNQ8N3F0 131 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 OR9G1Q8NH87 305 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 FLYWCH2Q96CP2 140 aaKnown RBP12.88□□□□□ -0.35
USP43-204ENST00000573955 EAF1Q96JC9 268 aaPredicted RBP12.88□□□□□ -0.35
USP43-204ENST00000573955 NABP2Q9BQ15 211 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 TMEM133Q9H2Q1 129 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 PLEKHA3Q9HB20 300 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 PRNDQ9UKY0 176 aa12.88□□□□□ -0.35
USP43-204ENST00000573955 POLQO75417 2590 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 REG1AP05451 166 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms