RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 LAMTOR1Q6IAA8 161 aa7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 RBPMS2Q6ZRY4 209 aaKnown RBP7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 ACOT7LQ6ZUV0 252 aa7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 THAP8Q8NA92 274 aa7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 METTL26Q96S19 204 aa7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 SPAG8Q99932 426 aaPredicted RBP7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 NEURL2Q9BR09 285 aa7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 C11orf1Q9H5F2 150 aa7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 VSIRQ9H7M9 311 aa7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 LSM5Q9Y4Y9 91 aaKnown RBP7.19□□□□□ -1.26
HCCAT5-201ENST00000569990 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 A8MZ25 164 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 SIX6O95475 246 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 IL4P05112 153 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 NPPCP23582 126 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 BMI1P35226 326 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 ZNF90Q03938 601 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 RAB32Q13637 225 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 USF2Q15853 346 aaPredicted RBP7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 FAM90A2PQ658T7 463 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 OR8G2PQ6IF36 304 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 LILRB2Q8N423 598 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 OR51G1Q8NGK1 321 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 ST8SIA2Q92186 375 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 TRGV9Q99603 122 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 TMEM231Q9H6L2 316 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 C19orf73Q9NVV2 129 aa7.18□□□□□ -1.26
HCCAT5-201ENST00000569990 DNAH9Q9NYC9 4486 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 IGHV3-66A0A0C4DH42 116 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 FNDC10F2Z333 226 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 L7N2F9 121 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 SSNA1O43805 119 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 CD5P06127 495 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 FABP1P07148 127 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 FRMD6-AS1P0C7T7 363 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 PVALBP20472 110 aaPredicted RBP7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 H2BFSP57053 126 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 S100A10P60903 97 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 VAMP2P63027 116 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 DLK1P80370 383 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 AKR1C1Q04828 323 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 ARL16Q0P5N6 197 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 TCF24Q7RTU0 167 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 TMEM144Q7Z5S9 345 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 OR10P1Q8NGE3 313 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 NMES1Q9C002 83 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 WFDC10AQ9H1F0 79 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 U3KQE9 123 aa7.17□□□□□ -1.26
HCCAT5-201ENST00000569990 IGKV3-7A0A075B6H7 116 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 A0A1W2PS18 150 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 SMCO3A2RU48 225 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 OR4C46A6NHA9 309 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 OR11H12B2RN74 326 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 DEDDO75618 318 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 DFFBO76075 338 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 HNRNPCP07910 306 aaKnown RBP eCLIP7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 P2RY1P47900 373 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 BCAP31P51572 246 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 CAV2P51636 162 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 RRAS2P62070 204 aaPredicted RBP7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 OR2F1Q13607 317 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 IQCF2Q8IXL9 164 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 DEFB125Q8N687 156 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 RNF125Q96EQ8 232 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 NARS2Q96I59 477 aaKnown RBP7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 ASCL2Q99929 193 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 RABAC1Q9UI14 185 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 ALG5Q9Y673 324 aa7.16□□□□□ -1.26
HCCAT5-201ENST00000569990 COL7A1Q02388 2944 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 FAM24AA6NFZ4 105 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 CST7O76096 145 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 TFPI2P48307 235 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 EIF2B2P49770 351 aaKnown RBP7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 LYZP61626 148 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 CYCSP99999 105 aaKnown RBP7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 ODF3L2Q3SX64 289 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 C16orf54Q6UWD8 224 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 TMEM182Q6ZP80 229 aaPredicted RBP7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 SBSPONQ8IVN8 264 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 GBGT1Q8N5D6 347 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 GLMPQ8WWB7 406 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 GRAMD2BQ96HH9 432 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 PBDC1Q9BVG4 233 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 GGACTQ9BVM4 153 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 TUBA4BQ9H853 241 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 NPVFQ9HCQ7 196 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 LYRM2Q9NU23 88 aaPredicted RBP7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 MGAT4CQ9UBM8 478 aa7.15□□□□□ -1.26
HCCAT5-201ENST00000569990 TRAV2A0A0B4J234 112 aa7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 IGSF23A1L1A6 192 aa7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 H0YIZ8 118 aa7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 BUB3O43684 328 aa7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 CFDP00746 253 aaPredicted RBP7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 NHLRC4P0CG21 123 aaPredicted RBP7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 GATA2P23769 480 aaPredicted RBP7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 RPL11P62913 178 aaKnown RBP7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 PAFAH1B2P68402 229 aa7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 SLC38A11Q08AI6 406 aa7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 RGS21Q2M5E4 152 aa7.14□□□□□ -1.27
HCCAT5-201ENST00000569990 LRRC37A5PQ49AS3 106 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms