RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TRAV1-2A0A0B4J238 106 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 A8MTW9 85 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 J3QRK9 145 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 UPK2O00526 184 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 MFNGO00587 321 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 FABP7O15540 132 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 CRXO43186 299 aaPredicted RBP4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 UBBP0CG47 229 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 SDC2P34741 201 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 OR10A3P58181 314 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 VBP1P61758 197 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 WFDC10BQ8IUB3 73 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 OR1L8Q8NGR8 309 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 LSM10Q969L4 123 aaKnown RBP4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 FAM3DQ96BQ1 224 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 YIPF6Q96EC8 236 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 URM1Q9BTM9 101 aaKnown RBP4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 CENPOQ9BU64 300 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 FUNDC2Q9BWH2 189 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 HINT2Q9BX68 163 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 ATG5Q9H1Y0 275 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 C12orf4Q9NQ89 552 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 NDUFA4L2Q9NRX3 87 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 DAPK2Q9UIK4 370 aa4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 RBMX2Q9Y388 322 aaKnown RBP4.28□□□□□ -1.72
HERPUD1-217ENST00000569429 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 A0A075B6Q4 140 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 METTL21EPA6NDL7 271 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 IFITM5A6NNB3 132 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 SLC17A2O00624 439 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 MT-CO2P00403 227 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 INSP01308 110 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 ELK1P19419 428 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 ETV6P41212 452 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 NPBWR1P48145 328 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 EIF4EBP1Q13541 118 aaPredicted RBP4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 POU2AF1Q16633 256 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 C1orf100Q5SVJ3 147 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 FAM78BQ5VT40 261 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 MORN5Q5VZ52 161 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 AMTNQ6UX39 209 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 ZNF493Q6ZR52 646 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 HSD17B10Q99714 261 aaKnown RBP4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM59Q9BXS4 323 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 DCSTAMPQ9H295 470 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 RCL1Q9Y2P8 373 aaKnown RBP4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 ICOSQ9Y6W8 199 aa4.27□□□□□ -1.73
HERPUD1-217ENST00000569429 A0A0D9SG52 128 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 A0A0J9YX75 114 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 TEX50A0A1B0GTY4 177 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 ZNF98A6NK75 572 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 NOTOA8MTQ0 251 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 IBA57-AS1B1ANH7 110 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 H3BMQ9 156 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 H3BS24 57 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 SOCS1O15524 211 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 SLC22A5O76082 557 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM50AO95807 157 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 IGLV2-14P01704 120 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 IGHV3-48P01763 117 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 CD37P11049 281 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 TGFBR1P36897 503 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 TALDO1P37837 337 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 RPS19P39019 145 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 PPP5CP53041 499 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 TAS2R60P59551 318 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 NCS1P62166 190 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 EBLN2Q6P2I7 272 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM144Q7Z5S9 345 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 H1FOOQ8IZA3 346 aaPredicted RBP4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 OR56B1Q8NGI3 324 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 RNASE8Q8TDE3 154 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 TCTEX1D2Q8WW35 142 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 S100ZQ8WXG8 99 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 C16orf92Q96LL3 132 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 GFI1Q99684 422 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 CMSS1Q9BQ75 279 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 NAA50Q9GZZ1 169 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 KCNK15Q9H427 330 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 COMMD3Q9UBI1 195 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 RAB22AQ9UL26 194 aa4.26□□□□□ -1.73
HERPUD1-217ENST00000569429 A0A0A6YYD4 124 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 A0A0B4J293 547 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM272A0A1B0GTI8 110 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 GAGE12BA1L429 117 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 RBFOX3A6NFN3 312 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 FAM25AB3EWG3 89 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 FAM25CB3EWG5 89 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 FAM25GB3EWG6 89 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 GAGE7O76087 117 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 GABARAPO95166 117 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 GAGE12FP0CL80 117 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 GAGE12GP0CL81 117 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 GAGE12IP0CL82 117 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 TAS2R31P59538 309 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 SFXN4Q6P4A7 337 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 MZT2AQ6P582 158 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 SIGLEC15Q6ZMC9 328 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM256Q8N2U0 113 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms