RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 INSL3P51460 131 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 TCTAP57738 103 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 TAS2R20P59543 309 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 EIF3IQ13347 325 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 OR10J3Q5JRS4 329 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 UBE2NLQ5JXB2 153 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 NCBP2-AS2Q69YL0 99 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 Q6AWC8 147 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 RPL7L1Q6DKI1 246 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 Q6ZUT4 128 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 C10orf111Q8N326 155 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 ZNF615Q8N8J6 731 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 APCDD1LQ8NCL9 501 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 OR2K2Q8NGT1 345 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 OR6K2Q8NGY2 324 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 ZNF414Q96IQ9 312 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 FAM19A4Q96LR4 140 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 C20orf78Q9BR46 151 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 EBPLQ9BY08 206 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 SLC17A9Q9BYT1 436 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 TMEM126AQ9H061 195 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 LSM5Q9Y4Y9 91 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 DNAJC15Q9Y5T4 150 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 PLIN4Q96Q06 1357 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 NUP188Q5SRE5 1749 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 TRBV20-1A0A075B6N2 111 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 TRGV10A0A0A0MS01 117 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 TRBV6-7A0A0A0MS04 114 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 A0A0B4J2E0 115 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 C9JAW5 83 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 SDCBPO00560 298 aaPredicted RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 LOXP28300 417 aaPredicted RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 POLR2JP52435 117 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 PPP1R1AQ13522 171 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 ACOT6Q3I5F7 207 aaPredicted RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 MEIG1Q5JSS6 88 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 SFXN4Q6P4A7 337 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 OPN5Q6U736 354 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 C3orf56Q8N813 242 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 ZDHHC22Q8N966 263 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 CMTM2Q8TAZ6 248 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 CLDN23Q96B33 292 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 ZMYND19Q96E35 227 aaPredicted RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 HSD17B10Q99714 261 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 RNASE7Q9H1E1 156 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 POMKQ9H5K3 350 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 HES4Q9HCC6 221 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 IDI2-AS1Q9NZ38 188 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 HIGD1AQ9Y241 93 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 PKIGQ9Y2B9 76 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 LRP6O75581 1613 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 COL16A1Q07092 1604 aaPredicted RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 ZNF106Q9H2Y7 1883 aaKnown RBP3.57□□□□□ -1.84
UBR1-208ENST00000569066 TSC2P49815 1807 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 FAM208AQ9UK61 1670 aaKnown RBP3.57□□□□□ -1.84
UBR1-208ENST00000569066 A0A1W2PRF3 423 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 A0A1W2PRM7 423 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 H0YJW9 148 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 H7C1C5 153 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 J3QR89 54 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 PTHLHP12272 177 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 RPS4Y1P22090 263 aaKnown RBP3.57□□□□□ -1.84
UBR1-208ENST00000569066 TPPP2P59282 170 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 RPS24P62847 133 aaKnown RBP3.57□□□□□ -1.84
UBR1-208ENST00000569066 LOXL1Q08397 574 aaPredicted RBP3.57□□□□□ -1.84
UBR1-208ENST00000569066 OR5A1Q8NGJ0 315 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 OR13C6PQ8NH95 151 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 CAMK2N2Q96S95 79 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 CDX2Q99626 313 aaPredicted RBP3.57□□□□□ -1.84
UBR1-208ENST00000569066 GGTLC1Q9BX51 225 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 COA1Q9GZY4 146 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 KLF12Q9Y4X4 402 aa3.57□□□□□ -1.84
UBR1-208ENST00000569066 IGHV3OR16-9A0A0B4J2B5 98 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 PGLYRP1O75594 196 aaPredicted RBP3.56□□□□□ -1.84
UBR1-208ENST00000569066 REG1AP05451 166 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 SRP19P09132 144 aaKnown RBP3.56□□□□□ -1.84
UBR1-208ENST00000569066 PPP1CCP36873 323 aaKnown RBP3.56□□□□□ -1.84
UBR1-208ENST00000569066 GZMMP51124 257 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 KRTDAPP60985 99 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 HLA-DRB3P79483 266 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 RASL11AQ6T310 242 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 HRCT1Q6UXD1 115 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 SPATA12Q7Z6I5 190 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 MSRB3Q8IXL7 192 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 ATOH7Q8N100 152 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 OR4C13Q8NGP0 309 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 OR10D3Q8NH80 312 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 ADTRPQ96IZ2 230 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 GPR21Q99679 349 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 OR2D2Q9H210 308 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 MANBALQ9NQG1 85 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 GPR84Q9NQS5 396 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 KLK12Q9UKR0 248 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 BRCA1P38398 1863 aaKnown RBP3.56□□□□□ -1.84
UBR1-208ENST00000569066 TRPM7Q96QT4 1865 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 NCKAP5O14513 1909 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 IGLV3-16A0A075B6K0 115 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms