RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 CMSS1Q9BQ75 279 aaKnown RBP4.88□□□□□ -1.63
TCF4-221ENST00000563888 UPK3BQ9BT76 320 aa4.88□□□□□ -1.63
TCF4-221ENST00000563888 NXF2Q9GZY0 626 aaKnown RBP4.88□□□□□ -1.63
TCF4-221ENST00000563888 TMEM231Q9H6L2 316 aa4.88□□□□□ -1.63
TCF4-221ENST00000563888 SPATA2Q9UM82 520 aa4.88□□□□□ -1.63
TCF4-221ENST00000563888 TRAV26-1A0A087WT03 109 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 FKBP6O75344 327 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 HRASP01112 189 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 CD37P11049 281 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 NPPCP23582 126 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 P2RY1P47900 373 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 YIF1BQ5BJH7 314 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 OGFRL1Q5TC84 451 aaPredicted RBP4.87□□□□□ -1.63
TCF4-221ENST00000563888 ZNF773Q6PK81 442 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 TMEM182Q6ZP80 229 aaPredicted RBP4.87□□□□□ -1.63
TCF4-221ENST00000563888 CIB1Q99828 191 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 TMEM208Q9BTX3 173 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 AMBNQ9NP70 447 aa4.87□□□□□ -1.63
TCF4-221ENST00000563888 MRPS16Q9Y3D3 137 aaKnown RBP4.87□□□□□ -1.63
TCF4-221ENST00000563888 C5orf52A6NGY3 159 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 LYRM9A8MSI8 78 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 ZNF705GA8MUZ8 300 aaPredicted RBP4.86□□□□□ -1.63
TCF4-221ENST00000563888 G3V2T6 193 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 GNG7O60262 68 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 TRAPPC2P0DI81 140 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 TRAPPC2BP0DI82 140 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 SNRPD3P62318 126 aaKnown RBP4.86□□□□□ -1.63
TCF4-221ENST00000563888 UNC119Q13432 240 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 Q499Y3 187 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 GDF5OSQ5U4N7 250 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 KDM4DQ6B0I6 523 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 CDH26Q8IXH8 852 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 C1orf158Q8N1D5 194 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 OR4B1Q8NGF8 309 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 ARHGAP5-AS1Q96IT6 56 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 SLC35B3Q9H1N7 401 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 TAS2R8Q9NYW2 309 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 NDUFA13Q9P0J0 144 aa4.86□□□□□ -1.63
TCF4-221ENST00000563888 F11RQ9Y624 299 aaKnown RBP4.86□□□□□ -1.63
TCF4-221ENST00000563888 TRBV5-5A0A0J9YX44 114 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 TEX50A0A1B0GTY4 177 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 SNTNA6NMZ2 147 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 SMIM1B2RUZ4 78 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 UPK2O00526 184 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 SIVA1O15304 175 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 TSHBP01222 138 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 UBBP0CG47 229 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 HLA-DRB4P13762 266 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 CD36P16671 472 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 DCKP27707 260 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 KRTAP10-4P60372 401 aaPredicted RBP4.85□□□□□ -1.63
TCF4-221ENST00000563888 B2MP61769 119 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 MRPS15P82914 257 aaKnown RBP4.85□□□□□ -1.63
TCF4-221ENST00000563888 TIMM50Q3ZCQ8 353 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 CCDC58Q4VC31 144 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 ZFP41Q8N8Y5 198 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 OR4C16Q8NGL9 310 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 PINX1Q96BK5 328 aaKnown RBP4.85□□□□□ -1.63
TCF4-221ENST00000563888 SLC29A1Q99808 456 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 PECRQ9BY49 303 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 LPAR5Q9H1C0 372 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 BET1LQ9NYM9 111 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 ARL2BPQ9Y2Y0 163 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 RBMX2Q9Y388 322 aaKnown RBP4.85□□□□□ -1.63
TCF4-221ENST00000563888 HLA-DRB4X5D2U9 266 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 LPAP08519 4548 aa4.85□□□□□ -1.63
TCF4-221ENST00000563888 A0A1B0GU03 582 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 PNMA8CA0A1B0GUJ8 204 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 A4D1N5 150 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 TNFSF12O43508 249 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 PRAF2O60831 178 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 MT-CO2P00403 227 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 IGLV2-11P01706 119 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 LIMS3P0CW19 117 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 LIMS4P0CW20 117 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 MT1HL1P0DM35 61 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 TMEM50BP56557 158 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 RPS11P62280 158 aaKnown RBP eCLIP4.84□□□□□ -1.63
TCF4-221ENST00000563888 AARDQ4LEZ3 155 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 LBHQ53QV2 105 aaPredicted RBP4.84□□□□□ -1.63
TCF4-221ENST00000563888 RBM48Q5RL73 367 aaKnown RBP4.84□□□□□ -1.63
TCF4-221ENST00000563888 MEDAGQ5VYS4 303 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 CROCCP3Q8IVE0 287 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 AQP12AQ8IXF9 295 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 H1FOOQ8IZA3 346 aaPredicted RBP4.84□□□□□ -1.63
TCF4-221ENST00000563888 ZNF709Q8N972 641 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 OR52I1Q8NGK6 324 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 RXFP4Q8TDU9 374 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 TRUB1Q8WWH5 349 aaKnown RBP4.84□□□□□ -1.63
TCF4-221ENST00000563888 SMIM19Q96E16 107 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 NARS2Q96I59 477 aaKnown RBP4.84□□□□□ -1.63
TCF4-221ENST00000563888 LINC00052Q96N35 136 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 METTL26Q96S19 204 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 CABLES2Q9BTV7 478 aa4.84□□□□□ -1.63
TCF4-221ENST00000563888 I3L2K1 104 aa4.83□□□□□ -1.64
TCF4-221ENST00000563888 RS1O15537 224 aa4.83□□□□□ -1.64
TCF4-221ENST00000563888 S100A9P06702 114 aaKnown RBP4.83□□□□□ -1.64
TCF4-221ENST00000563888 M6PRP20645 277 aa4.83□□□□□ -1.64
TCF4-221ENST00000563888 NFYAP23511 347 aaPredicted RBP4.83□□□□□ -1.64
TCF4-221ENST00000563888 NPBWR1P48145 328 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms