RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 CD7P09564 240 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 FRMD6-AS1P0C7T7 363 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 C8orf88P0DMB2 117 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 IGHV4-30-4P0DP06 118 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 NPY1RP25929 384 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 NPBWR1P48145 328 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 CD81P60033 236 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 IFITM3Q01628 133 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 C2orf83Q53S99 150 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 PVRIGQ6DKI7 326 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 LCN12Q6JVE5 192 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 PRSS54Q6PEW0 395 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 TOMM20LQ6UXN7 152 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 SBSPONQ8IVN8 264 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 TMEM61Q8N0U2 210 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 DEFB125Q8N687 156 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 SLC24A4Q8NFF2 622 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 COQ8AQ8NI60 647 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 ACY3Q96HD9 319 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 OR10C1Q96KK4 312 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 TXN2Q99757 166 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 CCDC32Q9BV29 185 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 WFDC10AQ9H1F0 79 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 NUDT15Q9NV35 164 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 TECRQ9NZ01 308 aaKnown RBP4.35□□□□□ -1.71
CDH13-206ENST00000562601 MRPL27Q9P0M9 148 aaKnown RBP4.35□□□□□ -1.71
CDH13-206ENST00000562601 TMED3Q9Y3Q3 217 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 PUS1Q9Y606 427 aaKnown RBP eCLIP4.35□□□□□ -1.71
CDH13-206ENST00000562601 COX11Q9Y6N1 276 aa4.35□□□□□ -1.71
CDH13-206ENST00000562601 DNAH7Q8WXX0 4024 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 IGKV3-7A0A075B6H7 116 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 TRAV14DV4A0A0A6YYC5 116 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 IGHV7-4-1A0A0J9YVY3 117 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 FAM25EA8MYX2 175 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 H3BP45 60 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 CORTO00230 105 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 SYNGR2O43760 224 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 CLN5O75503 358 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 UPK1BO75841 260 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 IFNA21P01568 189 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 IFNA4P05014 189 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 FCGR2BP31994 310 aaPredicted RBP4.34□□□□□ -1.71
CDH13-206ENST00000562601 TFPI2P48307 235 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 RND2P52198 227 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 POLR2GP62487 172 aaKnown RBP eCLIP4.34□□□□□ -1.71
CDH13-206ENST00000562601 RELQ04864 619 aaPredicted RBP4.34□□□□□ -1.71
CDH13-206ENST00000562601 RBPMS2Q6ZRY4 209 aaKnown RBP4.34□□□□□ -1.71
CDH13-206ENST00000562601 GTSCR1Q86UQ5 136 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 TMEM116Q8NCL8 245 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 OR2K2Q8NGT1 345 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 OR4X1Q8NH49 305 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 RNASEH2CQ8TDP1 164 aaKnown RBP4.34□□□□□ -1.71
CDH13-206ENST00000562601 NPIPB3Q92617 1050 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 RNF2Q99496 336 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 NEURL2Q9BR09 285 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 TUBA4BQ9H853 241 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 DAZ1Q9NQZ3 744 aaKnown RBP4.34□□□□□ -1.71
CDH13-206ENST00000562601 BATF3Q9NR55 127 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 GAR1Q9NY12 217 aaKnown RBP4.34□□□□□ -1.71
CDH13-206ENST00000562601 GSKIPQ9P0R6 139 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 UBQLN2Q9UHD9 624 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 SMPXQ9UHP9 88 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 U3KQ87 197 aa4.34□□□□□ -1.71
CDH13-206ENST00000562601 RPS10-NUDT3A0A1W2PQS6 291 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 C15orf62A8K5M9 175 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 OR11H12B2RN74 326 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 K7EMT4 169 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 CHEK1O14757 476 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 SSSCA1O60232 199 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 MED6O75586 246 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 IGKV1-17P01599 117 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 IGLC1P0CG04 106 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 SLC25A6P12236 298 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 OR10J1P30954 320 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 ASAH1Q13510 395 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 DCTN2Q13561 401 aaKnown RBP4.33□□□□□ -1.72
CDH13-206ENST00000562601 RAB32Q13637 225 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 GAMTQ14353 236 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 IAH1Q2TAA2 248 aaPredicted RBP4.33□□□□□ -1.72
CDH13-206ENST00000562601 SPANXN5Q5MJ07 72 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 ETFRF1Q6IPR1 90 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 ZNF600Q6ZNG1 722 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 LINC00299Q6ZSB3 139 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 SLC16A13Q7RTY0 426 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 GBGT1Q8N5D6 347 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 OR4D5Q8NGN0 318 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 ENKURQ8TC29 256 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 ZNF431Q8TF32 576 aaPredicted RBP4.33□□□□□ -1.72
CDH13-206ENST00000562601 MITD1Q8WV92 249 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 MARC2Q969Z3 335 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 ATP6V0BQ99437 205 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 RHPN1-AS1Q9BWJ2 59 aa4.33□□□□□ -1.72
CDH13-206ENST00000562601 PIGBOS1A0A0B4J2F0 54 aa4.32□□□□□ -1.72
CDH13-206ENST00000562601 RBMY1BA6NDE4 496 aaKnown RBP4.32□□□□□ -1.72
CDH13-206ENST00000562601 C5orf51A6NDU8 294 aa4.32□□□□□ -1.72
CDH13-206ENST00000562601 RBMY1EA6NEQ0 496 aaKnown RBP4.32□□□□□ -1.72
CDH13-206ENST00000562601 FAM90A26D6RGX4 464 aa4.32□□□□□ -1.72
CDH13-206ENST00000562601 CCNKO75909 580 aa4.32□□□□□ -1.72
CDH13-206ENST00000562601 DFFBO76075 338 aa4.32□□□□□ -1.72
CDH13-206ENST00000562601 SIX6O95475 246 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms