RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 RPEQ96AT9 228 aa5.91□□□□□ -1.46
CDH1-203ENST00000561751 SNRNP40Q96DI7 357 aaKnown RBP5.91□□□□□ -1.46
CDH1-203ENST00000561751 CITED1Q99966 193 aa5.91□□□□□ -1.46
CDH1-203ENST00000561751 MAP1LC3AQ9H492 121 aa5.91□□□□□ -1.46
CDH1-203ENST00000561751 ZMAT4Q9H898 229 aa5.91□□□□□ -1.46
CDH1-203ENST00000561751 PLEKHA3Q9HB20 300 aa5.91□□□□□ -1.46
CDH1-203ENST00000561751 GCM1Q9NP62 436 aa5.91□□□□□ -1.46
CDH1-203ENST00000561751 FREM3P0C091 2139 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 KIAA2026Q5HYC2 2103 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 GON4LQ3T8J9 2241 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 TCRBV4S1A1TA0A5B7 111 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 FBLL1A6NHQ2 334 aaKnown RBP5.9□□□□□ -1.46
CDH1-203ENST00000561751 FABP5P3A8MUU1 101 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 NPIPB6E9PJ23 425 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 EFNA2O43921 213 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 SPINK4O60575 86 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 NDUFS7O75251 213 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 DUTP33316 252 aaKnown RBP5.9□□□□□ -1.46
CDH1-203ENST00000561751 KIR2DS2P43631 304 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 FXYD3Q14802 87 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 PSG5Q15238 335 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 RRN3P1Q2M238 152 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 TMEM196Q5HYL7 178 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 ZNF497Q6ZNH5 498 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 MOGAT3Q86VF5 341 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 BCL6BQ8N143 479 aaPredicted RBP5.9□□□□□ -1.46
CDH1-203ENST00000561751 STPG3Q8N7X2 389 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 SYT8Q8NBV8 401 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 PTH2Q96A98 100 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 MMABQ96EY8 250 aaPredicted RBP5.9□□□□□ -1.46
CDH1-203ENST00000561751 NUDT22Q9BRQ3 303 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 RPP21Q9H633 154 aaKnown RBP5.9□□□□□ -1.46
CDH1-203ENST00000561751 MPC1Q9Y5U8 109 aa5.9□□□□□ -1.46
CDH1-203ENST00000561751 IGF2RP11717 2491 aa5.9□□□□□ -1.47
CDH1-203ENST00000561751 TRBV20-1A0A075B6N2 111 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 A0A1W2PQU0 124 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 LINC01546A6NGU7 62 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 B5MCH6 92 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 CHEK1O14757 476 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 FCN3O75636 299 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 FBLP22087 321 aaKnown RBP5.89□□□□□ -1.47
CDH1-203ENST00000561751 TNFRSF4P43489 277 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 CXCL12P48061 93 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 MEOX1P50221 254 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 RIGQ13278 110 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 CFAP126Q5VTH2 177 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 ZNF493Q6ZR52 646 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 LINC00173Q6ZV60 143 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 YRDCQ86U90 279 aaKnown RBP5.89□□□□□ -1.47
CDH1-203ENST00000561751 PPP1R27Q86WC6 154 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 C1orf210Q8IVY1 113 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 OR5AN1Q8NGI8 311 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.89□□□□□ -1.47
CDH1-203ENST00000561751 TMEM158Q8WZ71 300 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 PIGCQ92535 297 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 NRGNQ92686 78 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 ARPC1AQ92747 370 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 RAB37Q96AX2 223 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 MLST8Q9BVC4 326 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 ZNF355PQ9NSJ1 428 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 DEPPQ9NTK1 212 aa5.89□□□□□ -1.47
CDH1-203ENST00000561751 AMMECR1Q9Y4X0 333 aaPredicted RBP5.89□□□□□ -1.47
CDH1-203ENST00000561751 CNOT1A5YKK6 2376 aaKnown RBP5.89□□□□□ -1.47
CDH1-203ENST00000561751 SETXQ7Z333 2677 aaKnown RBP5.89□□□□□ -1.47
CDH1-203ENST00000561751 TRAV24A0A0B4J272 114 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 C19orf71A6NCJ1 209 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 BRI3O95415 125 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 CELA2AP08217 269 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 ZNF688P0C7X2 276 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 NHLRC4P0CG21 123 aaPredicted RBP5.88□□□□□ -1.47
CDH1-203ENST00000561751 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
CDH1-203ENST00000561751 GNG3P63215 75 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 GAGE2BQ13066 116 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 ADIPOQQ15848 244 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 C12orf74Q32Q52 190 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 GAGE2EQ4V326 116 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 CARD17Q5XLA6 110 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 TRAT1Q6PIZ9 186 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 TEN1Q86WV5 123 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 RPS19BP1Q86WX3 136 aaKnown RBP5.88□□□□□ -1.47
CDH1-203ENST00000561751 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 RLN3Q8WXF3 142 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 DLX4Q92988 240 aaPredicted RBP5.88□□□□□ -1.47
CDH1-203ENST00000561751 C1orf159Q96HA4 380 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 PRELID3AQ96N28 172 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 GPHA2Q96T91 129 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 NABP2Q9BQ15 211 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 HINT2Q9BX68 163 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 OCIAD1Q9NX40 245 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 GAGE2DQ9UEU5 116 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 HILPDAQ9Y5L2 63 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 U3KQK5 164 aa5.88□□□□□ -1.47
CDH1-203ENST00000561751 ZZEF1O43149 2961 aa5.87□□□□□ -1.47
CDH1-203ENST00000561751 GGTLC3B5MD39 225 aa5.87□□□□□ -1.47
CDH1-203ENST00000561751 PEX7O00628 323 aa5.87□□□□□ -1.47
CDH1-203ENST00000561751 MT-ATP8P03928 68 aa5.87□□□□□ -1.47
CDH1-203ENST00000561751 SLC25A5P05141 298 aaKnown RBP5.87□□□□□ -1.47
CDH1-203ENST00000561751 IFITM1P13164 125 aa5.87□□□□□ -1.47
CDH1-203ENST00000561751 GCSHP23434 173 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms