RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 VSTM5A8MXK1 200 aa12.92□□□□□ -0.34
PBX1-219ENST00000560641 THBDP07204 575 aa12.92□□□□□ -0.34
PBX1-219ENST00000560641 MYOD1P15172 320 aa12.92□□□□□ -0.34
PBX1-219ENST00000560641 TMEM177Q53S58 311 aa12.92□□□□□ -0.34
PBX1-219ENST00000560641 TCTEX1D4Q5JR98 221 aa12.92□□□□□ -0.34
PBX1-219ENST00000560641 ATP6V0BQ99437 205 aa12.92□□□□□ -0.34
PBX1-219ENST00000560641 TTTY12Q9BZ98 90 aa12.92□□□□□ -0.34
PBX1-219ENST00000560641 LAMA1P25391 3075 aa12.92□□□□□ -0.34
PBX1-219ENST00000560641 DSCAML1Q8TD84 2053 aa12.91□□□□□ -0.34
PBX1-219ENST00000560641 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
PBX1-219ENST00000560641 MBNL2Q5VZF2 373 aaKnown RBP12.91□□□□□ -0.34
PBX1-219ENST00000560641 SDK2Q58EX2 2172 aa12.91□□□□□ -0.34
PBX1-219ENST00000560641 AGFG2O95081 481 aa12.91□□□□□ -0.34
PBX1-219ENST00000560641 AZU1P20160 251 aa12.91□□□□□ -0.34
PBX1-219ENST00000560641 GNG5P63218 68 aa12.91□□□□□ -0.34
PBX1-219ENST00000560641 ZCCHC24Q8N2G6 241 aaKnown RBP12.91□□□□□ -0.34
PBX1-219ENST00000560641 ZADH2Q8N4Q0 377 aa12.91□□□□□ -0.34
PBX1-219ENST00000560641 ZC2HC1AQ96GY0 325 aa12.91□□□□□ -0.34
PBX1-219ENST00000560641 INSIG2Q9Y5U4 225 aa12.91□□□□□ -0.34
PBX1-219ENST00000560641 Q6AWC8 147 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 PERPQ96FX8 193 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 IGKV3-15P01624 115 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 TCRAP04437 139 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 SLC25A5P05141 298 aaKnown RBP12.9□□□□□ -0.34
PBX1-219ENST00000560641 HLA-DRB4P13762 266 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 CD24P25063 80 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 CXorf67Q86X51 503 aaPredicted RBP12.9□□□□□ -0.34
PBX1-219ENST00000560641 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 GON4LQ3T8J9 2241 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 LTC4SQ16873 150 aa12.9□□□□□ -0.34
PBX1-219ENST00000560641 BRWD1Q9NSI6 2320 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 SPINK14Q6IE38 97 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 A0A1B0GUT8 65 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 IGHV3-7P01780 117 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 GP9P14770 177 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 CD46P15529 392 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 UQCRFS1P47985 274 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 RIGQ13278 110 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 MLANAQ16655 118 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 Q86TA4 180 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 OSR1Q8TAX0 266 aaPredicted RBP12.89□□□□□ -0.35
PBX1-219ENST00000560641 PHLDA1Q8WV24 401 aaPredicted RBP12.89□□□□□ -0.35
PBX1-219ENST00000560641 RITA1Q96K30 269 aa12.89□□□□□ -0.35
PBX1-219ENST00000560641 F8W1H4 67 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 MAGEA5P43359 124 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 BHLHA15Q7RTS1 189 aaPredicted RBP12.88□□□□□ -0.35
PBX1-219ENST00000560641 DAZAP1Q96EP5 407 aaKnown RBP12.88□□□□□ -0.35
PBX1-219ENST00000560641 MCRIP2Q9BUT9 160 aaKnown RBP12.88□□□□□ -0.35
PBX1-219ENST00000560641 TANC2Q9HCD6 1990 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 LINC01546A6NGU7 62 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 ZNF138P52744 262 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 ERHP84090 104 aaKnown RBP12.88□□□□□ -0.35
PBX1-219ENST00000560641 HOXA4Q00056 320 aaPredicted RBP12.88□□□□□ -0.35
PBX1-219ENST00000560641 IGHV3-64DA0A0J9YX35 117 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 PGPA6NDG6 321 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 CCL4P13236 92 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 LINC00305Q7Z4B0 112 aa12.88□□□□□ -0.35
PBX1-219ENST00000560641 SMIM13P0DJ93 91 aa12.87□□□□□ -0.35
PBX1-219ENST00000560641 VGLL1Q99990 258 aa12.87□□□□□ -0.35
PBX1-219ENST00000560641 GNG7O60262 68 aa12.87□□□□□ -0.35
PBX1-219ENST00000560641 IGLV2-11P01706 119 aa12.87□□□□□ -0.35
PBX1-219ENST00000560641 CRYGCP07315 174 aa12.87□□□□□ -0.35
PBX1-219ENST00000560641 IGHV1-2P23083 117 aa12.87□□□□□ -0.35
PBX1-219ENST00000560641 LINC00696Q6ZRV3 163 aa12.87□□□□□ -0.35
PBX1-219ENST00000560641 KIR2DL2P43627 348 aaPredicted RBP12.86□□□□□ -0.35
PBX1-219ENST00000560641 SSBP2P81877 361 aaPredicted RBP12.86□□□□□ -0.35
PBX1-219ENST00000560641 SRSF1Q07955 248 aaKnown RBP eCLIP12.86□□□□□ -0.35
PBX1-219ENST00000560641 HINT2Q9BX68 163 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 C12orf49Q9H741 205 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 GAGE12HA6NDE8 117 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 LHBP01229 141 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 SAA1P0DJI8 122 aaPredicted RBP12.86□□□□□ -0.35
PBX1-219ENST00000560641 TRGV9Q99603 122 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 ZMAT4Q9H898 229 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 PILRBQ9UKJ0 227 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 ZNF137PP52743 207 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 C1orf162Q8NEQ5 155 aaPredicted RBP12.86□□□□□ -0.35
PBX1-219ENST00000560641 OTORQ9NRC9 128 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 SPANXB1Q9NS25 103 aaPredicted RBP12.86□□□□□ -0.35
PBX1-219ENST00000560641 TMEM14CQ9P0S9 112 aa12.86□□□□□ -0.35
PBX1-219ENST00000560641 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
PBX1-219ENST00000560641 J3QR89 54 aa12.85□□□□□ -0.35
PBX1-219ENST00000560641 SRSF6Q13247 344 aaKnown RBP12.85□□□□□ -0.35
PBX1-219ENST00000560641 UTF1Q5T230 341 aa12.85□□□□□ -0.35
PBX1-219ENST00000560641 ZNF833PQ6ZTB9 187 aa12.85□□□□□ -0.35
PBX1-219ENST00000560641 MRPS17Q9Y2R5 130 aaKnown RBP12.85□□□□□ -0.35
PBX1-219ENST00000560641 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
PBX1-219ENST00000560641 TM2D2Q9BX73 214 aa12.85□□□□□ -0.35
PBX1-219ENST00000560641 THYN1Q9P016 225 aa12.85□□□□□ -0.35
PBX1-219ENST00000560641 SH3BGRL2Q9UJC5 107 aa12.85□□□□□ -0.35
PBX1-219ENST00000560641 SNAI2O43623 268 aa12.84□□□□□ -0.35
PBX1-219ENST00000560641 TIMM8AO60220 97 aaPredicted RBP12.84□□□□□ -0.35
PBX1-219ENST00000560641 CLUHP3Q96NS8 147 aa12.84□□□□□ -0.35
PBX1-219ENST00000560641 DOCK10Q96BY6 2186 aa12.84□□□□□ -0.35
PBX1-219ENST00000560641 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
PBX1-219ENST00000560641 MEF2CQ06413 473 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms